standards > reporting guideline > DOI:10.25504/FAIRsharing.h1v36j
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ready Using Phenotype Ontologies in GVF

Abbreviation: GVF Guidelines


General Information
This guideline describes a set of best practices when using phenotype ontologies to annotate genomic variant files using Genome Variation Format (GVF) and the Sequence Ontology.

Homepage http://www.sequenceontology.org/so_wiki/index.php/Using_Phenotype_Ontologies_in_GVF

Countries that developed this resource United States

Created in 2009

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How to cite this record FAIRsharing.org: GVF Guidelines; Using Phenotype Ontologies in GVF; DOI: https://doi.org/10.25504/FAIRsharing.h1v36j; Last edited: Feb. 13, 2020, 2:56 p.m.; Last accessed: Aug 06 2020 11:58 a.m.


This record is maintained by keilbeck

Record updated: Feb. 13, 2020, 2:55 p.m. by The FAIRsharing Team.

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Publications

Integrating phenotype ontologies across multiple species.

Mungall CJ,Gkoutos GV,Smith CL,Haendel MA,Lewis SE,Ashburner M
Genome Biol 2010

View Paper (PubMed) View Publication


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  • BG/G004358/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • HG000330 (National Human Genome Research Institute (NHGRI), Bethesda, MD, USA)

  • U54 HG004028 (U.S. National Library of Medicine)