FAIRsharing is here! From our first incarnation, BioSharing.org, which focussed on the life sciences, we are growing into FAIRsharing.org, to serve users across all disciplines and support Findable, Accessible, Interoperable and Reusable (FAIR) data.
Standards > model/format > bsg-s000581


ready Root System Markup Language

Abbreviation:RSML


General Information
RSML follows the XML standard to store 2D or 3D image metadata, plant and root properties and geometries, continuous functions along individual root paths and a suite of annotations at the image, plant or root scales, at one or several time points. Plant ontologies are used to describe botanical entities that are relevant at the scale of root system architecture. An xml-schema describes the features and constraints of RSML and open-source packages have been developed in several languages (R, Excel, Java, Python, C#) to enable researchers to integrate RSML files into popular research workflow.



Record added: Feb. 20, 2015, 10:17 p.m.
Record updated: July 11, 2017, 11:22 a.m. by The FAIRsharing Team.


Support

General

Additional Information


Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use





Connectivity
Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined


Implementing Databases (0)

No Related Databases


Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

  • This record is in need of a maintainer. If you login, you'll be able to claim this record.

Funds

Grant Number(s)

  • P7/29 (Belgian Science Policy Interuniversity Attraction Poles Program (BELSPO), Belgium)

  • ANR–11–BSV6–0018 (The French National Research Agency (ANR), France)


Publications

Root system markup language: toward a unified root architecture description language.

Lobet G,Pound MP,Diener J,Pradal C,Draye X,Godin C,Javaux M,Leitner D,Meunier F,Nacry P,Pridmore TP,Schnepf A
Plant Physiol 2015

View Paper (PubMed) View Paper (DOI)