standards > model/format > DOI:10.25504/FAIRsharing.enpfm4
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deprecated mzXML

General Information
This record was deprecated on April 8, 2015 for the following reason(s): This resource is obsolete, and has been subsumed (together with mzData) into mzML. Please use mzML instead ( For more information, see

mzXML an open, generic XML (extensible markup language) representation of MS data. This format is now deprecated and it has been superseded by mzML

This record is replaced by:


Countries that developed this resource United Kingdom

Taxonomic range

Knowledge Domains 

How to cite this record mzXML; mzXML; DOI:; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Dec 08 2021 9:10 a.m.

Record added: Feb. 23, 2015, 1:34 p.m.
Record updated: Dec. 29, 2016, 1:01 a.m. by The FAIRsharing Team.

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No support information provided.

Additional Information


    No tools defined


No XSD schemas defined

Access / Retrieve Data

Conditions of Use


A common open representation of mass spectrometry data and its application to proteomics researc

Pedrioli PG, Eng JK, Hubley R, Vogelzang M, Deutsch EW, Raught B, Pratt B, Nilsson E, Angeletti RH, Apweiler R, Cheung K, Costello CE, Hermjakob H, Huang S, Julian RK, Kapp E, McComb ME, Oliver SG, Omenn G, Paton NW, Simpson R, Smith R, Taylor CF, Zhu W, Aebersold R.
Nat Biotechnology 2004

View Paper (PubMed)

What is mzXML good for?

Lin SM, Zhu L, Winter AQ, Sasinowski M, Kibbe WA.
Expert Rev Proteomics 2005

View Paper (PubMed)

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

Identifier Schemas

No identifier schema standards defined


No metrics standards defined

Related Databases (1)
Mass Spectrometry Virtual Interactive Environment
MassIVE is a community resource developed by the NIH-funded Center for Computational Mass Spectrometry to promote the global, free exchange of mass spectrometry data. MassIVE datasets can be assigned ProteomeXchange accessions to satisfy publication requirements.

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