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OBO Relations Ontology

Abbreviation: RO

General Information

RO is a collection of relations intended primarily for standardization across ontologies in the OBO Foundry and wider OBO library. It incorporates ROCore upper-level relations such as part of as well as biology-specific relationship types such as develops from. The predecessor of RO was OBO_REL. Many of the relations in OBO_REL have been ceded to BFO.

This record replaces or incorporates the following deprecated resources:

OBO ReLationship

Homepage https://github.com/oborel/obo-relations/

Countries that developed this resource United States

Created in 2010

Taxonomic range

All

Subjects

User-defined Tags

Relations

How to cite this record FAIRsharing.org: RO; OBO Relations Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9w8ea0; Last edited: Jan. 29, 2020, 3:43 p.m.; Last accessed: Jul 04 2020 5:12 p.m.

Record added: March 22, 2016, 12:06 p.m.
Record updated: Jan. 29, 2020, 3:42 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.9w8ea0' by 'The FAIRsharing Team' at 15:42, 29 Jan 2020 (approved):

	'licences' has been modified:
		Before:
			Creative Commons Attribution 3.0 Unported (CC BY 3.0)|https://creativecommons.org/licenses/by/3.0/|Data
		After:
			Creative Commons CC0 1.0 Universal (CC0 1.0) Public Domain Dedication|https://creativecommons.org/publicdomain/zero/1.0/|Data
		Added:
			Creative Commons CC0 1.0 Universal (CC0 1.0) Public Domain Dedication|https://creativecommons.org/publicdomain/zero/1.0/|Data
		Removed:
			Creative Commons Attribution 3.0 Unported (CC BY 3.0)|https://creativecommons.org/licenses/by/3.0/|Data

	'supportLinks' has been modified:
		Before:
			mailing list|http://lists.sourceforge.net/lists/listinfo/obo-relations
			online documentation|https://github.com/oborel/obo-relations/wiki/DifferencesWithOldRO
			online documentation|https://github.com/oborel/obo-relations/wiki/ROAndBFO
			online documentation|http://agroportal.lirmm.fr/ontologies/RO
		After:
			forum|https://github.com/oborel/obo-relations/issues
			mailing list|http://lists.sourceforge.net/lists/listinfo/obo-relations
			online documentation|https://github.com/oborel/obo-relations/wiki/DifferencesWithOldRO
			online documentation|https://github.com/oborel/obo-relations/wiki/ROAndBFO
		Added:
			forum|https://github.com/oborel/obo-relations/issues
		Removed:
			online documentation|http://agroportal.lirmm.fr/ontologies/RO

	'miriam_id' has been modified:
		Before: None
		After: 

	'dataProcesses' has been modified:
		Before:
			Download OWL
			Download OBO
			Browse Ontology
		After:
			Download OWL
			Download OBO
			Browse Ontology
			AgroPortal: Browse / Download
		Added:
			AgroPortal: Browse / Download
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.9w8ea0' by 'The FAIRsharing Team' at 19:51, 09 Nov 2017 (approved):

	'bioportal_abbreviation' has been modified:
		Before: RO
		After: RO

Edits to 'https://fairsharing.org/FAIRsharing.9w8ea0' by 'The FAIRsharing Team' at 19:50, 09 Nov 2017 (approved):

	'supportLinks' has been modified:
		Before:
			http://lists.sourceforge.net/lists/listinfo/obo-relations
			https://github.com/oborel/obo-relations/wiki/DifferencesWithOldRO
			https://github.com/oborel/obo-relations/wiki/ROAndBFO
		After:
			http://lists.sourceforge.net/lists/listinfo/obo-relations
			https://github.com/oborel/obo-relations/wiki/DifferencesWithOldRO
			https://github.com/oborel/obo-relations/wiki/ROAndBFO
			http://agroportal.lirmm.fr/ontologies/RO
		Added:
			http://agroportal.lirmm.fr/ontologies/RO
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.9w8ea0' by 'The FAIRsharing Team' at 12:12, 21 Sep 2016 (approved):

	'contactORCID' has been modified:
		Before: 
		After: 0000-0002-6601-2165 Domain list has changed:  Previous values: Ontology Standardization|None| Relations|None| New values:  Ontology Standardization|None| Relations|None| Life Science|domain| Organisations have changed:  Previous values: LBNL New values:  Lawrence Berkeley National Laboratory US National Institutes of Health (NIH)

Support

General

forum	GitHub Issue Tracker
Mailing List	Mailing list
online documentation	Differences with Previous Versions
online documentation	RO and BFO

Additional Information

Contact

Chris Mungall ORCID

External Links

Bioportal	http://bioportal.bioontology.org/ontologies/RO
OBO	http://obofoundry.org/ontology/ro.html

Tools

No tools defined

Schemas

No XSD schemas defined

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Creative Commons CC0 1.0 Universal (CC0 1.0) Public Domain Dedication

Data Release

Download OWL	http://purl.obolibrary.org/obo/ro.owl
Download OBO	http://purl.obolibrary.org/obo/ro.obo

Data Access

Browse Ontology	http://www.ontobee.org/browser/term.php?o=RO&iri=http://www.w3.org/200 ...
AgroPortal: Browse / Download	http://agroportal.lirmm.fr/ontologies/RO

Publications

No publications available

RO Ontology Display

View in BioPortal.

Disclaimer: This widget assumes the availability of the ontology resources in the NCBO BioPortal.

View in OBO Foundry.

Related Standards

Reporting Guidelines

Minimum Information about a Molecular Interaction Causal Statement

Terminology Artifacts

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases (3)

Planteome
A resource providing data on bioentities and their associated ontology terms for Plant Biology. The database provides access to ontology-based annotations of genes, phenotypes and germplasms from about 90 plant species. A number of internal and external ontologies are used to annotate the biological data available from this resource.

OBO Foundry
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.

Encyclopedia of Life
The Encyclopedia of Life (EOL) is a collaborative encyclopedia to describe all known living species. It identifies sources of biodiversity knowledge that are legally and practically shareable; integrates them with other sources and adds metadata; provides searching and other services; and collaborates with other projects to support data sharing.

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is in need of a maintainer. If you login, you'll be able to claim this record.

Funds

National Institutes of Health (NIH), Bethesda, MD, USA (Government body)

Maintains

Lawrence Berkeley National Laboratory (LBNL), CA, USA (Lab) Lead

OBO Relations Ontology

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