standards > reporting guideline > DOI:10.25504/FAIRsharing.72mafs
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deprecated LINCS Pilot Phase 1 Metadata Standards: Antibody Reagents

Abbreviation: LINCS 1: Antibody Reagents


General Information
This record was deprecated on Aug. 10, 2016 for the following reason(s): This standard was a pilot study for the LINC2 Antibody Reagents standard (https://biosharing.org/bsg-s000657) and as such has been superseded by this standard.

The LINCS Pilot Phase 1 metadata standards annotate reagents outside the context of the experiments in which they were used. Antibodies are extremely useful because of their high target specificity in detection of proteins, capture of proteins for isolation, purification and quantification, and selective inhibition of protein function (e.g., membrane receptor).


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Homepage http://www.lincsproject.org/LINCS/data/previous-standards

Countries that developed this resource United States

Created in 2012

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How to cite this record FAIRsharing.org: LINCS 1: Antibody Reagents; LINCS Pilot Phase 1 Metadata Standards: Antibody Reagents; DOI: https://doi.org/10.25504/FAIRsharing.72mafs; Last edited: Jan. 8, 2019, 1:38 p.m.; Last accessed: Sep 20 2021 9:32 p.m.


This record is maintained by cchung  ORCID

Record added: May 18, 2016, 10:14 a.m.
Record updated: Oct. 22, 2016, 8:03 p.m. by The FAIRsharing Team.

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Related Databases (2)
Immunology Database and Analysis Portal
The Immunology Database and Analysis Portal (ImmPort) data repository was created for the exploration of clinical and basic research data on immunology and associated findings. ImmPort intends to promote effective data sharing across the basic, clinical and translational research communities. It collects data both from clinical and mechanistic studies on human subjects and from immunology studies on model organisms. The ImmPort ecosystem consists of four components: private data, shared data, data analysis, and resources-for data archiving, dissemination, analyses, and reuse.

Library of Integrated Network-Based Cellular Signatures Data Portal
The LINCS Data Portal provides a unified interface for searching LINCS dataset packages and reagents. LINCS data are being made openly available as a community resource through a series of data releases, so as to enable scientists to address a broad range of basic research questions and to facilitate the identification of biological targets for new disease therapies. LINCS datasets consist of assay results from cultured and primary human cells treated with bioactive small molecules, ligands such as growth factors and cytokines, or genetic perturbations. Many different assays are used to monitor cell responses, including assays measuring transcript and protein expression; cell phenotype data are captured by biochemical and imaging readouts. Assays are typically carried out on multiple cell types, and at multiple timepoints; perturbagen activity is monitored at multiple doses.

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