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Pigeon Pea Ontology

Abbreviation: CO_341

General Information

Reference Plant Ontologies are being developed in the context of the Planteome project and are being integrated with the Crop Ontology, which provides harmonized breeders’ trait names, measurement methods, scales and standard variables for many crops. The Pigeon Pea Ontology is one of these reference plant ontologies integrated within the Crop Ontology.

Homepage http://www.cropontology.org/ontology/CO_341/Pigeonpea

Countries that developed this resource Worldwide

Created in 2015

Taxonomic range

Cajanus cajan

Knowledge Domains

Subjects

User-defined Tags

Plant Phenotypes and Traits

How to cite this record FAIRsharing.org: CO_341; Pigeon Pea Ontology; DOI: https://doi.org/10.25504/FAIRsharing.ehe3yp; Last edited: Feb. 27, 2020, 11:56 a.m.; Last accessed: Feb 28 2020 6:37 p.m.

Record added: Oct. 12, 2017, 10:44 a.m.
Record updated: Feb. 27, 2020, 11:56 a.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.ehe3yp' by 'The FAIRsharing Team' at 11:56, 27 Feb 2020 (not approved):

	'onto_disciplines' has been modified:
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			Agriculture
			Botany
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			Agriculture
			Botany
			Life Science
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			Life Science
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	'contactORCID' has been modified:
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		After: 0000-0002-6020-5919

Edits to 'https://fairsharing.org/FAIRsharing.ehe3yp' by 'The FAIRsharing Team' at 14:06, 04 Feb 2020 (approved):

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			Agriculture
			Botany
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			Crop Ontology
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			Crop Ontology
			Plant Trait Ontology
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			Plant Trait Ontology
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	'supportLinks' has been modified:
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			email|helpdesk@cropontology-curationtool.org
			forum|http://www.cropontology.org/feedback
			help|http://www.cropontology.org/help
			online documentation|http://agroportal.lirmm.fr/ontologies/CO_341
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			email|helpdesk@cropontology-curationtool.org
			forum|http://www.cropontology.org/feedback
			help|http://www.cropontology.org/help
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			online documentation|http://agroportal.lirmm.fr/ontologies/CO_341

	'dataProcesses' has been modified:
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			Download OBO Format
			Download RDF
			Download CSV
			Add new terms
			Browse
			Login
			Annotation tool
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			Download OBO Format
			Download RDF
			Download CSV
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			Browse
			AgroPortal: Browse / Download
			Annotation tool
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			Login

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			phenotype
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Edits to 'https://fairsharing.org/FAIRsharing.ehe3yp' by 'The FAIRsharing Team' at 11:54, 04 Sep 2018 (approved):

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			Download OBO Format
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Edits to 'https://fairsharing.org/FAIRsharing.ehe3yp' by 'The FAIRsharing Team' at 08:42, 04 Sep 2018 (approved):

	'supportLinks' has been modified:
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			email|helpdesk@cropontology-curationtool.org
			forum|http://www.cropontology.org/feedback
			online documentation|http://agroportal.lirmm.fr/ontologies/CO_341
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			email|helpdesk@cropontology-curationtool.org
			forum|http://www.cropontology.org/feedback
			help|http://www.cropontology.org/help
			online documentation|http://agroportal.lirmm.fr/ontologies/CO_341
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			help|http://www.cropontology.org/help
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			Download OBO Format
			Download RDF
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			Add new terms
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			Add new terms
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Edits to 'https://fairsharing.org/FAIRsharing.ehe3yp' by 'The FAIRsharing Team' at 12:11, 12 Apr 2018 (approved):

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Edits to 'https://fairsharing.org/FAIRsharing.ehe3yp' by 'The FAIRsharing Team' at 11:17, 12 Apr 2018 (approved):

	'in_curation' has been modified:
		Before: True
		After: False

Edits to 'https://fairsharing.org/FAIRsharing.ehe3yp' by 'The FAIRsharing Team' at 19:56, 25 Jan 2018 (approved):

	'homepage' has been modified:
		Before: http://www.cropontology.org/ontology/CO_341
		After: http://www.cropontology.org/ontology/CO_341/Pigeonpea

Edits to 'https://fairsharing.org/FAIRsharing.ehe3yp' by 'The FAIRsharing Team' at 14:00, 14 Nov 2017 (approved):

	'homepage' has been modified:
		Before: http://www.cropontology.org/ontology/CO_341/Pigeonpea
		After: http://www.cropontology.org/ontology/CO_341

Edits to 'https://fairsharing.org/FAIRsharing.ehe3yp' by 'The FAIRsharing Team' at 20:24, 26 Oct 2017 (approved):

	'shortname' has been modified:
		Before: Pigeon Pea Ontology
		After: CO_341

Edits to 'https://fairsharing.org/FAIRsharing.ehe3yp' by 'The FAIRsharing Team' at 20:10, 26 Oct 2017 (approved):

	'organizations' has been modified:
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			ICRISAT|Research institute|Maintains
			www.cgiar.org|Consortium|Maintains
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			ICRISAT|Research institute|Maintains
			CGIAR Research Program on Grain Legumes|Consortium|Maintains
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			CGIAR Research Program on Grain Legumes|Consortium|Maintains
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			www.cgiar.org|Consortium|Maintains

Edits to 'https://fairsharing.org/FAIRsharing.ehe3yp' by 'The FAIRsharing Team' at 20:04, 26 Oct 2017 (approved):

	'homepage' has been modified:
		Before: http://www.cropontology.org/rdf/
		After: http://www.cropontology.org/ontology/CO_341/Pigeonpea

Support

General

support email	Crop Ontology Helpdesk
forum	Crop Ontology Forum
help	Video Tutorials

Additional Information

Contact

Elizabeth Arnaud ORCID

Tools

No tools defined

Schemas

No XSD schemas defined

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Creative Commons Attribution 4.0 International (CC BY 4.0)

Data Release

Download OBO Format	http://www.cropontology.org/obo/CO_341
Download RDF	http://www.cropontology.org/ontology/CO_341/Pigeonpea/nt
Download CSV	http://www.cropontology.org/report?ontology_id=CO_341

Data Curation

Add new terms	http://www.cropontology.org/add-ontology
Annotation tool	http://www.cropontology.org/annotation-tool

Data Access

Browse	http://www.cropontology.org/ontology/CO_341/Pigeonpea
AgroPortal: Browse / Download	http://agroportal.lirmm.fr/ontologies/CO_341

REST Web Services

Crop Ontology API

http://www.cropontology.org/api

Publications

No publications available

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Implementing Databases (2)

Planteome
A resource providing data on bioentities and their associated ontology terms for Plant Biology. The database provides access to ontology-based annotations of genes, phenotypes and germplasms from about 90 plant species. A number of internal and external ontologies are used to annotate the biological data available from this resource.

AgroPortal
The AgroPortal project reuses the biomedical domain’s semantic tools and insights to serve agronomy, but also food, plant, agriculture and biodiversity sciences. We offer a portal that features ontology hosting, search, versioning, visualization, comment, and recommendation; enables semantic annotation; stores and exploits ontology alignments; and enables interoperation with the semantic web. The AgroPortal specifically satisfies requirements of the agronomy community in terms of ontology formats (e.g., SKOS vocabularies and trait dictionaries) and supported features (offering detailed metadata and advanced annotation capabilities). The AgroPortal content is automatically retrieved by FAIRsharing.org (https://fairsharing.org/) and the Agrisemantics Map of Data Standards (http://vest.agrisemantics.org/).

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is in need of a maintainer. If you login, you'll be able to claim this record.

Maintains

ICRISAT (Research institute)
CGIAR Research Program on Grain Legumes (Consortium)

Pigeon Pea Ontology

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