How to cite this record FAIRsharing.org: VARIO; Variation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.65xkbs; Last edited: March 13, 2019, 11:20 a.m.; Last accessed: Jul 21 2019 12:39 p.m.
Publication for citation Variation Ontology for annotation of variation effects and mechanisms. Vihinen M; Genome Res ; 2013; 10.1101/gr.157495.113;
Record added: Oct. 24, 2017, 9:41 a.m.
Record updated: March 13, 2019, 11:18 a.m. by The FAIRsharing Team.
Edits to 'https://fairsharing.org/FAIRsharing.65xkbs' by 'The FAIRsharing Team' at 11:18, 13 Mar 2019 (approved): 'related_standards' has been modified: Before: After: Sequence Ontology Evidence codes Added: Sequence Ontology Evidence codes Removed: 'supportLinks' has been modified: Before: online documentation|http://variationontology.org/principles.shtml online documentation|http://variationontology.org/annotation.shtml After: firstname.lastname@example.org online documentation|http://variationontology.org/principles.shtml online documentation|http://variationontology.org/annotation.shtml Added: email@example.com Removed:
Edits to 'https://fairsharing.org/FAIRsharing.65xkbs' by 'The FAIRsharing Team' at 11:34, 21 Nov 2018 (approved): 'domains' has been modified: Before: DNA structural variation Deoxyribonucleic acid (DNA) Life Science Protein Ribonucleic acid (RNA) Variant After: DNA structural variation Deoxyribonucleic acid (DNA) Life Science Protein Ribonucleic acid (RNA) Sequence variant Added: Sequence variant Removed: Variant
Edits to 'https://fairsharing.org/FAIRsharing.65xkbs' by 'The FAIRsharing Team' at 20:11, 09 Jan 2018 (approved): 'description' has been modified: Before: Variation Ontology, VariO, is an ontology for standardized, systematic description of effects, consequences and mechanisms of variations. After: Variation Ontology, VariO, is an ontology for standardized, systematic description of effects, consequences and mechanisms of variations. VariO allows unambiguous description of variation effects as well as computerized analyses over databases utilizing the ontology for annotation. VariO is a position specific ontology that can be used to describe effects of variations on DNA, RNA and/or protein level, whatever is appropriate.
|support email||VariO Contact|
|online documentation||VariO Principles|
|online documentation||VariO Annotation|
No XSD schemas defined
Types and effects of protein variations.
Hum Genet 2015
Variation Ontology for annotation of variation effects and mechanisms.
Genome Res 2013
No guidelines defined
Models and Formats
No syntax standards defined
No identifier schema standards defined
No metrics standards defined
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.
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Department of Experimental Medical Science, Lund University (University) Lead