Maize Ontology

Abbreviation: CO_322

General Information

The Maize Ontology is part of the Crop Ontology (CO) project. The Crop Ontology has been created to compile validated concepts along with their inter-relationships on anatomy, structure and phenotype of Crops, on trait measurement and methods as well as on Germplasm with the multi-crop passport terms. The concepts of the CO are being used to curate agronomic databases and describe the data. The use of ontology terms to describe agronomic phenotypes and the accurate mapping of these descriptions into databases is important in comparative phenotypic and genotypic studies across species and gene-discovery experiments as it provides harmonized description of the data and therefore facilitates the retrieval of information.

Homepage http://www.cropontology.org/ontology/CO_322/Maize

Countries that developed this resource Worldwide

Created in 2016

Taxonomic range

Zea mays

Knowledge Domains

Subjects

User-defined Tags

Data standards

Plant Phenotypes and Traits

How to cite this record FAIRsharing.org: CO_322; Maize Ontology; DOI: https://doi.org/10.25504/FAIRsharing.eeyne8; Last edited: Feb. 21, 2020, 2:44 p.m.; Last accessed: Jan 25 2021 1:13 a.m.

Record added: Jan. 18, 2018, 3:41 p.m.
Record updated: Feb. 21, 2020, 2:43 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.eeyne8' by 'The FAIRsharing Team' at 08:32, 21 Feb 2020 (approved):

	'onto_disciplines' has been modified:
		Before:
			Agriculture
			Botany
		After:
			Agriculture
			Botany
			Life Science
			Ontology and Terminology
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			Life Science
			Ontology and Terminology
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	'dataProcesses' has been modified:
		Before:
			Download OBO Format
			Download RDF
			Download CSV
			Browse
			Annotation tool
			Add new term
			AgroPortal: Browse / Download
		After:
			Download OBO Format
			Download RDF
			Download CSV
			Browse
			Annotation tool
			Add new term
		Added:
		Removed:
			AgroPortal: Browse / Download

Edits to 'https://fairsharing.org/FAIRsharing.eeyne8' by 'The FAIRsharing Team' at 12:18, 04 Feb 2020 (approved):

	'onto_disciplines' has been modified:
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			Agriculture
			Botany
			Life Science
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			Botany
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			Life Science

	'related_standards' has been modified:
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			OBO Format Syntax and Semantics
			Crop Ontology
			Web Ontology Language
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			OBO Format Syntax and Semantics
			Crop Ontology
			Web Ontology Language
			Plant Trait Ontology
		Added:
			Plant Trait Ontology
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	'supportLinks' has been modified:
		Before:
			email|helpdesk@cropontology-curationtool.org
			help|http://www.cropontology.org/feedback
			help|http://www.cropontology.org/help
			online documentation|http://agroportal.lirmm.fr/ontologies/CO_322
		After:
			email|helpdesk@cropontology-curationtool.org
			help|http://www.cropontology.org/feedback
			help|http://www.cropontology.org/help
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			online documentation|http://agroportal.lirmm.fr/ontologies/CO_322

	'dataProcesses' has been modified:
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			Download OBO Format
			Download RDF
			Download CSV
			Browse
			Login
			Annotation tool
			Add new term
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			Download OBO Format
			Download RDF
			Download CSV
			Browse
			AgroPortal: Browse / Download
			Annotation tool
			Add new term
		Added:
			AgroPortal: Browse / Download
		Removed:
			Login

Edits to 'https://fairsharing.org/FAIRsharing.eeyne8' by 'The FAIRsharing Team' at 12:34, 04 Sep 2018 (approved):

	'domains' has been modified:
		Before:
			Agriculture
			Botany
			Food
			Life Science
			Phenotype
			Plant Phenotypes and Traits
		After:
			Agriculture
			Botany
			Data standards
			Food
			Life Science
			Phenotype
			Plant Phenotypes and Traits
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			Data standards
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	'supportLinks' has been modified:
		Before:
			email|helpdesk@cropontology-curationtool.org
			help|http://www.cropontology.org/feedback
			online documentation|http://agroportal.lirmm.fr/ontologies/CO_322
		After:
			email|helpdesk@cropontology-curationtool.org
			help|http://www.cropontology.org/feedback
			help|http://www.cropontology.org/help
			online documentation|http://agroportal.lirmm.fr/ontologies/CO_322
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			help|http://www.cropontology.org/help
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	'dataProcesses' has been modified:
		Before:
			Download OBO Format
			Download RDF
			Download CSV
		After:
			Download OBO Format
			Download RDF
			Download CSV
			Browse
			Login
			Annotation tool
			Add new term
		Added:
			Browse
			Login
			Annotation tool
			Add new term
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.eeyne8' by 'The FAIRsharing Team' at 12:12, 12 Apr 2018 (approved):

	'in_curation' has been modified:
		Before: True
		After: False

Edits to 'https://fairsharing.org/FAIRsharing.eeyne8' by 'The FAIRsharing Team' at 19:32, 25 Jan 2018 (approved):

	'homepage' has been modified:
		Before: http://www.cropontology.org/ontology/CO_322
		After: http://www.cropontology.org/ontology/CO_322/Maize

Edits to 'https://fairsharing.org/FAIRsharing.eeyne8' by 'The FAIRsharing Team' at 12:14, 23 Jan 2018 (approved):

	'supportLinks' has been modified:
		Before:
			http://agroportal.lirmm.fr/ontologies/CO_322
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			http://agroportal.lirmm.fr/ontologies/CO_322
			helpdesk@cropontology-curationtool.org
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Edits to 'https://fairsharing.org/FAIRsharing.eeyne8' by 'The FAIRsharing Team' at 11:06, 23 Jan 2018 (approved):

	'homepage' has been modified:
		Before: http://www.cropontology.org/rdf/
		After: http://www.cropontology.org/ontology/CO_322

Support

General

support email	Crop Ontology Helpdesk
help	Crop Ontology Forum
help	Video Tutorials

Additional Information

Contact

Helpdesk

Tools

No tools defined

Schemas

No XSD schemas defined

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Creative Commons Attribution 4.0 International (CC BY 4.0)

Data Release

Download OBO Format	http://www.cropontology.org/obo/CO_322
Download RDF	http://www.cropontology.org/ontology/CO_322/Maize/nt
Download CSV	http://www.cropontology.org/report?ontology_id=CO_322

Data Curation

Annotation tool	http://www.cropontology.org/annotation-tool
Add new term	http://www.cropontology.org/add-ontology

Data Access

Browse

http://www.cropontology.org/ontology/CO_322/Maize

REST Web Services

Crop Ontology API

http://www.cropontology.org/api

Publications

No publications available

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases (2)

Planteome
A resource providing data on bioentities and their associated ontology terms for Plant Biology. The database provides access to ontology-based annotations of genes, phenotypes and germplasms from about 90 plant species. A number of internal and external ontologies are used to annotate the biological data available from this resource.

GWAS Atlas
The GWAS Atlas is a manually curated resource of genome-wide variant-trait associations for a wide range of species.

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is in need of a maintainer. If you login, you'll be able to claim this record.

Maintains

CGIAR, Montpellier, France (Government body)
International Maize and Wheat Improvement Center (CIMMYT) (Consortium)

Maize Ontology

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