standards > model/format > bsg-s001356
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in development Web3 Unique Representation of Carbohydrate Structures

Abbreviation: WURCS


General Information
The Web3 Unique Representation of Carbohydrate Structures (WURCS) defines a generalizable and unique linear representation for carbohydrate structures. A recent update (WURCS 2.0) was created to handle structural ambiguity around (potential) carbonyl groups incidental to the carbohydrate analysis. WURCS 2.0 can represent a wider variety of carbohydrate structures containing ambiguous monosaccharides, such as those whose ring closure is undefined or whose anomeric information is only known.

Homepage http://www.wurcs-wg.org

Countries that developed this resource Japan

Created in 2014

Taxonomic range

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Awaiting DOI assignment.


This record is maintained by Issaku  ORCID

Record added: Jan. 29, 2019, 9:38 a.m.
Record updated: Feb. 5, 2019, 11:26 a.m. by The FAIRsharing Team.

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No support information provided.

Additional Information


Tools

Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use

Applies to: Data use




Publications

WURCS 2.0 Update To Encapsulate Ambiguous Carbohydrate Structures.

Matsubara M,Aoki-Kinoshita KF,Aoki NP,Yamada I,Narimatsu H
J Chem Inf Model 2017

View Paper (PubMed) View Publication

WURCS: the Web3 unique representation of carbohydrate structures.

Tanaka K,Aoki-Kinoshita KF,Kotera M,Sawaki H,Tsuchiya S,Fujita N,Shikanai T,Kato M,Kawano S,Yamada I,Narimatsu H
J Chem Inf Model 2014

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

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Terminology Artifacts

Models and Formats

No syntax standards defined

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Metrics

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Related Databases (5)
GlycoNAVI
GlycoNAVI is a repository of data relevant to carbohydrate research. It contains a free suite of carbohydrate research tools organized by domain, including glycans, proteins, lipids, genes, diseases and samples.

GlycomeDB
GlycomeDB is the result of a systematic data integration effort, and provides an overview of all carbohydrate structures available in public databases, as well as cross-links.

UniCarbKB
UniCarbKB is an initiative that aims to promote the creation of an online information storage and search platform for glycomics and glycobiology research. The knowledgebase will offer a freely accessible and information-rich resource supported by querying interfaces, annotation technologies and the adoption of common standards to integrate structural, experimental and functional data.

GlyTouCan
The international glycan structure repository for glycans published in the literature. Any glycan structure, ranging in resolution from monosaccharide composition to fully defined structures can be registered and have an accession number assigned as long as there are no inconsistencies in the structure.

GlyGen: Computational and Informatics Resources for Glycoscience
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data. GlyGen retrieves information from multiple international data sources and integrates and harmonizes this data. This web portal allows exploring this data and performing unique searches that cannot be executed in any of the integrated databases alone.

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