Open Microscopy Environment Ontology
Created in 2018
|OMERO client-server software||http://www.openmicroscopy.org/info/omero|
No XSD schemas defined
Conditions of Use
OME Ontology: A Novel Data and Tool Integration Methodology for Multi-Modal Imaging in the Life Sciences.
Kobayashi, Norio; Kume, Satoshi; Moore, Josh; Swedlow, Jason R.
figshare (poster) 2018
No guidelines defined
No semantic standards defined
Models and Formats
No identifier schema standards defined
No metrics standards defined
IDR is a prototype platform for publishing, mining and integrating bioimaging data at scale, following the Euro-BioImaging/ELIXIR imaging strategy using the OMERO and Bio-Formats open source software built by the Open Microscopy Environment. Deployed on an OpenStack cloud running on the EMBL-EBI’s Embassy resource, it includes image data linked to independent studies from genetic, RNAi, chemical, localisation and geographic high content screens, super-resolution microscopy, and digital pathology.
This record is not implemented by any policy.
Head Office for Information Systems and Cybersecurity (ISC), RIKEN, Saitama, Japan (Research institute) Lead
RIKEN Center for Biosystems Dynamics Research (BDR), RIKEN, Hyogo, Japan (Research institute)
5K16536,17K00434, 17K00424 and 18K19766 (Japan Society for the Promotion of Science, Tokyo, Japan)