standards > model/format > bsg-s001619
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ready BD5


General Information
BD5 is an open HDF5-based format for representing quantitative data of biological dynamics.

Homepage https://github.com/openssbd/BDML-BD5

Countries that developed this resource Japan

Created in 2020

Taxonomic range




Awaiting DOI assignment.

Publication for citation  BD5: An open HDF5-based data format to represent quantitative biological dynamics data. Kyoda K,Ho KHL,Tohsato Y,Itoga H,Onami S; PLoS One ; 2020; 10.1371/journal.pone.0237468;


This record is maintained by kkyoda  ORCID

Record added: June 28, 2021, 6:46 a.m.
Record updated: June 30, 2021, 11:40 a.m. by kkyoda.




Support

No support information provided.

Additional Information


Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use





Publications

BD5: An open HDF5-based data format to represent quantitative biological dynamics data.

Kyoda K,Ho KHL,Tohsato Y,Itoga H,Onami S
PLoS One 2020

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Related Databases (1)
SSBD: Systems Science of Biological Dynamics
SSBD is a database that collects and shares quantitative biological dynamics data, microscopy images, and software tools. SSBD provides a rich set of resources for analyzing quantitative biological data, such as single-molecule, cell, and gene expression nuclei. Quantitative biological data are collected from a variety of species, sources and methods. These include data obtained from both experiment and computational simulation.

Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

Funds

Grant Number(s)

  • JP18H05412 (Ministry of Education, Culture, Sports, Science and Technology of Japan (MEXT), Tokyo, Japan)

  • JPMJCR1511 (Japan Science and Technology Agency (JST), Tokyo, Japan)

  • NA (RIKEN Open Life Science Platform)

  • NA (National Bioscience Database Center (NBDC), Tokyo, Japan)