standards > terminology artifact > DOI:10.25504/FAIRsharing.mf91p5


ready Ontology for MicroRNA Target

Abbreviation: OMIT


General Information
The purpose of the OMIT ontology is to establish data exchange standards and common data elements in the microRNA (miR) domain. Biologists (cell biologists in particular) and bioinformaticians can make use of OMIT to leverage emerging semantic technologies in knowledge acquisition and discovery for more effective identification of important roles performed by miRs in humans' various diseases and biological processes (usually through miRs' respective target genes).



How to cite this record FAIRsharing.org: OMIT; Ontology for MicroRNA Target; DOI: https://doi.org/10.25504/FAIRsharing.mf91p5; Last edited: March 11, 2019, 2:36 p.m.; Last accessed: Mar 26 2019 5:49 a.m.

Publication for citation  OMIT: dynamic, semi-automated ontology development for the microRNA domain. Huang J,Dang J,Borchert GM,Eilbeck K,Zhang H,Xiong M,Jiang W,Wu H,Blake JA,Natale DA,Tan M; PLoS One ; 2014; 10.1371/journal.pone.0100855;


Record updated: March 11, 2019, 2:33 p.m. by The FAIRsharing Team.

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Publications

OMIT: dynamic, semi-automated ontology development for the microRNA domain.

Huang J,Dang J,Borchert GM,Eilbeck K,Zhang H,Xiong M,Jiang W,Wu H,Blake JA,Natale DA,Tan M
PLoS One 2014

View Paper (PubMed) View Publication

OMIT: a domain-specific knowledge base for microRNA target prediction.

Huang J,Townsend C,Dou D,Liu H,Tan M
Pharm Res 2011

View Paper (PubMed) View Publication

OmniSearch: a semantic search system based on the Ontology for MIcroRNA Target (OMIT) for microRNA-target gene interaction data.

Huang J,Gutierrez F,Strachan HJ,Dou D,Huang W,Smith B,Blake JA,Eilbeck K,Natale DA,Lin Y,Wu B,Silva Nd,Wang X,Liu Z,Borchert GM,Tan M,Ruttenberg A
J Biomed Semantics 2016

View Paper (PubMed) View Publication

OMIT Ontology Display

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Grant Number(s)

  • 1350064 (National Science Foundation (NSF), USA)

  • U01CA180982 (U.S. National Library of Medicine)