standards > terminology artifact > DOI:10.25504/FAIRsharing.7zxrs6


ready Edinburgh human developmental anatomy abstract version 2

Abbreviation: EHDAA2


General Information
The EHDAA2 ontology is a human developmental anatomy covering the first 49 days [Carnegie stages (CS)1–20], primarily structured around the parts of organ systems and their development. The ontology includes more than 2000 anatomical entities (AEs) that range from the whole embryo, through organ systems and organ parts down to simple or leaf tissues (groups of cells with the same morphological phenotype), as well as features such as cavities. It represents a complete rebuilding of the EHDA intended to meet current standards. The intention has been to include as much information about human developmental anatomy as is practical and as is available in the literature.


This record replaces or incorporates the following deprecated resources:

Homepage http://bioportal.bioontology.org/ontologies/EHDAA2

Countries that developed this resource United Kingdom

Created in 2012

Taxonomic range




How to cite this record FAIRsharing.org: EHDAA2; Edinburgh human developmental anatomy abstract version 2; DOI: https://doi.org/10.25504/FAIRsharing.7zxrs6; Last edited: Aug. 13, 2019, 4:14 p.m.; Last accessed: Feb 28 2020 8:34 p.m.


Record updated: May 20, 2019, 4:07 p.m. by The FAIRsharing Team.

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Publications

A new ontology (structured hierarchy) of human developmental anatomy for the first 7 weeks (Carnegie stages 1-20).

Bard J
J Anat 2012

View Paper (PubMed) View Publication

EHDAA2 Ontology Display

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Implementing Databases (2)
Bgee DataBase for Gene Expression Evolution
Bgee is a database to retrieve and compare gene expression patterns in multiple animal species, produced from multiple data types (RNA-Seq, Affymetrix, in situ hybridization, and EST data). Bgee is based exclusively on curated "normal", healthy, expression data (e.g., no gene knock-out, no treatment, no disease), to provide a comparable reference of normal gene expression. Bgee produces calls of presence/absence of expression, and of differential over-/under-expression, integrated along with information of gene orthology, and of homology between organs. This allows comparisons of expression patterns between species.
OBO Foundry
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.

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