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Standards > terminology artifact > bsg-s002686


ready Semanticscience Integrated Ontology

Abbreviation:SIO


General Information
The Semanticscience Integrated Ontology (SIO) provides an integrated ontology of types and relations for rich description of objects, processes and their attributes.


Collected/Recommended By



This record is maintained by micheldumontier  ORCID

Record updated: July 6, 2017, 3:50 p.m. by The FAIRsharing Team.


In Collections

Support

General

Additional Information

External Links


Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use

License: Creative Commons Attribution (CC-BY) 4.0 International (4.0)
Applies to: Data use





Connectivity
SIO Ontology Display

View in BioPortal.


Disclaimer: This widget assumes the availability of the ontology resources in the NCBO BioPortal.


Related Standards

Reporting Guidelines

No guidelines defined

Models and Formats

No syntax standards defined


Implementing Databases (2)
DisGeNET: a database of gene-disease associations
DisGeNET is a discovery platform containing one of the largest collections available of genes and variants involved in human diseases. DisGeNET integrates data from expert curated repositories, GWAS catalogues, animal models, and the scientific literature, and covers the whole landscape of human diseases. The current version (v4.0) contains 429,036 associations, between 17,381 genes and 15,093 diseases, disorders and clinical or abnormal human phenotypes, and 72,870 variant-disease associations between 46,589 SNPs and 6,356 diseases and phenotypes. The data are homogeneously annotated with controlled vocabularies and community-driven ontologies. Additionally, several original metrics are provided to assist the prioritization of genotype-phenotype relationships. The information is accessible through a web interface, a Cytoscape App, an RDF SPARQL endpoint, scripts in several programming languages, and an R package.

Bio2RDF
Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers.

Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

Maintains


Publications

The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery.

Dumontier M, Baker CJ, Baran J, Callahan A, Chepelev L, Cruz-Toledo J, Del Rio NR, Duck G, Furlong LI, Keath N, Klassen D, McCusker JP, Queralt-Rosinach N, Samwald M, Villanueva-Rosales N, Wilkinson MD, Hoehndorf R.
J Biomed Semantics 2014

View Paper (PubMed) View Paper (DOI)