bsg-c000071
Image for AIRR Data Commons  AIRR Data Commons
The AIRR Data Commons consists of the network of distributed repositories that adhere to the standards set out by the AIRR Community. This collection contains standards and repositories either created by the AIRR community or approved for use within the AIRR community.

This record is maintained by: bcorrie   ORCID

Record added: May 13, 2020, 4:56 p.m..
Record updated: Oct. 19, 2020, 12:29 p.m. by The FAIRsharing Team.

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Knowledge Domains 

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Publications

Adaptive Immune Receptor Repertoire Community recommendations for sharing immune-repertoire sequencing data.

Rubelt F,Busse CE,Bukhari SAC,Burckert JP,Mariotti-Ferrandiz E,Cowell LG,Watson CT,Marthandan N,Faison WJ,Hershberg U,Laserson U,Corrie BD,Davis MM,Peters B,Lefranc MP,Scott JK,Breden F,Luning Prak ET,Kleinstein SH
Nat Immunol 2017

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AIRR Community Standardized Representations for Annotated Immune Repertoires.

Vander Heiden JA,Marquez S,Marthandan N,Bukhari SAC,Busse CE,Corrie B,Hershberg U,Kleinstein SH,Matsen Iv FA,Ralph DK,Rosenfeld AM,Schramm CA,Christley S,Laserson U
Front Immunol 2018

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Reproducibility and Reuse of Adaptive Immune Receptor Repertoire Data.

Breden F,Luning Prak ET,Peters B,Rubelt F,Schramm CA,Busse CE,Vander Heiden JA,Christley S,Bukhari SAC,Thorogood A,Matsen Iv FA,Wine Y,Laserson U,Klatzmann D,Douek DC,Lefranc MP,Collins AM,Bubela T,Kleinstein SH,Watson CT,Cowell LG,Scott JK,Kepler TB
Front Immunol 2017

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The ADC API: A Web API for the Programmatic Query of the AIRR Data Commons

S Christley, A Aguiar, G Blanck, F Breden, SAC Bukhari, C E Busse, J Jaglale, S L Harikrishnan, U Laserson, B Peters, A Rocha, C A Schramm, S Taylor, J A V Heiden, B Zimonja, C T Watson, B Corrie and L G Cowell on behalf of The AIRR Community
Frontiers in Big Data 2020

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14 records in view

Registry Name Abbreviation Type Subject Domain Taxonomy Related Database Related Standard Related Policy In Collection/Recommendation Status

Adaptive Immune Receptor Repertoire Data Commons API Specification ADC API Specification Standard None None ready

Adaptive Immune Receptor Repertoire Data Model AIRR Data Model Standard None None ready

Adaptive Immune Receptor Repertoire Rearrangement Schema AIRR Rearrangement Schema Standard None ready

Adaptive Immune Receptor Repertoire: Repertoire Schema AIRR Repertoire Schema Standard None ready

Adaptive Immune Receptor Repertoire Software Guidelines AIRR Software Guidelines Standard None None ready
Cell Ontology CL Standard None ready
Disease Ontology DOID Standard None ready

iReceptor Public Archive IPA Database None ready

Minimal information about Adaptive Immune Receptor Repertoire MiAIRR Standard None ready
NCBI Taxonomy NCBITAXON Standard ready
NCI Thesaurus NCIt Standard ready
UBER anatomy ONtology UBERON Standard None
None ready
Units Ontology UO Standard ready

VDJServer VDJServer Database None ready