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Advanced Genetics
Standards and databases currently recommended in the Advanced Genetics Author Guidelines

This record is maintained by: MylesAxton   ORCID

This recommendation is taken from the following policy:

Record added: Feb. 28, 2019, 4:59 p.m..
Record updated: July 16, 2020, 9:23 p.m. by The FAIRsharing Team.

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Taxonomic range

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Showing records 1 - 50 of 65.
Registry Name Abbreviation Type Subject Domain Taxonomy Related Database Related Standard Related Policy In Collection/Recommendation Status

Ag Data Commons Ag Data Commons Database ready

Allele Frequency Net Database AFND Database None ready

ArrayExpress ArrayExpress Database ready
BioAssay Ontology BAO Standard ready

CellML CellML Standard ready

ChEMBL ChEMBL Database ready

ClinVar ClinVar Database ready

Database of genomic structural VARiation dbVar Database ready

Database of Genomic Variants Archive DGVa Database None deprecated

Database of Genotypes and Phenotypes dbGaP Database ready

Database of Single Nucleotide Polymorphism dbSNP Database ready

DataCite Metadata Schema DataCite Metadata Schema Standard ready
eagle-i Research Resource Ontology ERO Standard ready
Environment Ontology ENVO Standard ready

Eukaryotic Pathogen, Vector and Host Informatics Resource VEuPathDB Database ready

European Nucleotide Archive ENA Database ready
Experimental Factor Ontology EFO Standard ready
FAIR Metrics - Accessible Usage License FM-R1.1 Standard None ready
FAIR Metrics - Detailed Provenance FM-R1.2 Standard None ready
FAIR Metrics - Machine-readability of metadata FM-F2 Standard None ready
FAIR Metrics - Meets Community Standards FM-R1.3 Standard None ready

FAIRsharing FAIRsharing Database ready

FlyBase FlyBase Database ready

FORCE11 Data Citation Principles FORCE11 DC Standard ready

GenBank GenBank Database ready

Gene Expression Omnibus GEO Database ready

HUGO Gene Nomenclature Committee HGNC Database ready
Human Phenotype Ontology HP Standard ready

Investigation Study Assay Tabular ISA-Tab Standard ready

Japanese Genotype-phenotype Archive JGA Database ready

Leiden Open Variation Database LOVD Database ready

MetaboLights MTBLS Database ready

MGI Mouse Gene Expression Database GXD Database ready

MIAME Notation in Markup Language MINiML Standard ready

Minimal Information Required In the Annotation of Models MIRIAM Standard ready

Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource MGI Database ready

mz Markup Language mzML Standard ready

NCBI BioProject BioProject Database ready

NCBI BioSample BioSample Database ready

NCBI Gene NCBI Gene Database ready

NCBI Probe Database ProbeDB Database None None ready

NCBI Trace Archives NCBI Trace Archives Database None ready

NCBI Viral Genomes Resource NCBI Viral Genomes Resource Database ready
NCI Thesaurus NCIt Standard ready

Online Mendelian Inheritance in Man OMIM Database ready
Ontology for Biomedical Investigations OBI Standard ready

Open Science Framework OSF Database ready

PRoteomics IDEntifications database PRIDE Database ready
PSI Molecular Interaction Controlled Vocabulary PSI-MI CV Standard ready

PubChem PubChem Database ready