ELIXIR Core Data and Data Deposition Resources
ELIXIR unites Europe’s leading life science organisations in managing and safeguarding the increasing volume of data being generated by publicly funded research. It coordinates, integrates and sustains bioinformatics resources across its member states and enables users in academia and industry to access services that are vital for their research.

This record is maintained by: PeteMcQ   ORCID

Record added: March 9, 2017, 1:28 p.m..
Record updated: Jan. 10, 2019, 3:21 p.m. by The FAIRsharing Team.

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Registry Name Abbreviation Type Subject Domain Taxonomy Related Database Related Standard Related Policy In Collection/Recommendation Status

ArrayExpress ArrayExpress Database ready

arrayMap - Genome Profiles in Cancer arrayMap Database None ready

Bgee DataBase for Gene Expression Evolution Bgee Database None ready

BioModels BioModels Database ready

BioStudies BioStudies Database None ready

ChEMBL ChEMBL Database ready
Chemical Entities of Biological Interest CHEBI Standard None ready

Continuously Automated Model Evaluation CAMEO Database None None None ready

CRISPRdb CRISPRdb Database None None None ready

Database Of Local Biomolecular Conformers Dolbico Database None None None ready

Database of Orthologous Groups OrthoDB Database None None ready

Ensembl Ensembl Database ready

Ensembl Genomes Ensembl Genomes Database None ready

Enzyme Portal Enzyme Portal Database None ready

Eukaryotic Promoter Database EPD Database None ready

European Nucleotide Archive ENA Database ready

Europe PubMed Central Europe PMC Database None None ready

Expression Atlas Expression Atlas Database ready

Gene Ontology Annotation GOA Database ready

Genetic and Genomic Information System GnpIS Database None ready

HOGENOM HOGENOM Database None None None ready

Human Endogenous Retrovirus database HERVd Database None None ready

Human Protein Atlas HPA Database None ready

IDSM IDSM Database None None None ready

ImMunoGeneTics Information System IMGT Database None ready

Insertion Sequence Finder IS Finder Database None None None ready

IntAct molecular interaction database IntAct Database ready

Integrated relational Enzyme database IntEnz Database ready

Integrated resource of protein families, domains and functional sites InterPro Database None ready

LiceBase LiceBase Database None ready

MetaboLights MTBLS Database ready

MGnify MGnify Database ready

Microbial Genome Annotation & Analysis Platform MicroScope Database None None ready

Molecular INTeraction database MINT Database ready

neXtProt neXtProt Database None ready

Orphanet Orphanet Database None ready

Orthologous MAtrix OMA Database None ready

Pfam Pfam Database ready

ProDom ProDom Database None None ready

PROSITE PROSITE Database ready

Protein Data Bank in Europe PDBe Database ready

PRoteomics IDEntifications database PRIDE Database ready

Reactome - a curated knowledgebase of biological pathways Reactome Database ready

Rfam Rfam Database None None ready

Rhea Rhea Database ready

Sequencing Initiative Suomi SISu Database None None None ready

STRING STRING Database None ready

SugarBind SugarBind Database None None ready

Swiss-Czech Proteomics Server SWICZ Database None None None ready

SWISS-MODEL Repository of 3D protein structure models SWISS-MODEL Database None ready