bsg-c000034
Image for FAIRDOM Community Standards  FAIRDOM Community Standards
FAIRDOM is a joint action of ERA-Net ERASysAPP and European Research Infrastructure ISBE to establish a data and model management service facility for Systems Biology. The prime mission is to support researchers, students, trainers, funders and publishers by enabling Systems Biology projects to make their Data, Operating procedures and Models, Findable, Accessible, Interoperable and Reusable (FAIR). This collections encompasses community standards used in FAIRDOM.

This record is maintained by: FAIRDOM 

Record added: Nov. 28, 2016, 2:48 p.m..
Record updated: Nov. 28, 2016, 3:25 p.m. by The FAIRsharing Team.

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23 records in view

Registry Name Abbreviation Type Subject Domain Taxonomy Related Database Related Standard Related Policy In Collection/Recommendation Status

Binary Alignment Map Format BAM Standard None ready

Biological Pathway eXchange BioPAX Standard None ready

Browser Extensible Data Format BED Standard None
None ready

CellML CellML Standard ready

FASTA Sequence Format FASTA Standard None ready

FASTQ Sequence and Sequence Quality Format FASTQ Sequence and Sequence Quality Format Standard None ready

Gel electrophoresis Markup Language PSI GelML Standard None ready

Gene Feature File version 1 GFF Standard None None deprecated

Investigation Study Assay Tabular ISA-Tab Standard ready

KEGG Mark-up Language KGML Standard None ready

Mathematics Markup Language MathML Standard None
None None ready

MicroArray Gene Expression Markup Language MAGE-ML Standard None deprecated

MicroArray Gene Expression Tabular Format MAGE-TAB Standard None
None ready

mz Markup Language mzML Standard ready

Neural Open Markup Language NeuroML Standard None ready

Open Microscopy Environment eXtensible Markup Language OME-XML Standard None ready

PDBx/mmCIF PDBx/mmCIF Standard None ready

Pharmacometrics Markup Language PharmML Standard None ready

Sequence Alignment Map SAM Standard None None ready

Simulation Experiment Description Markup Language SED-ML Standard None ready

Systems Biology Graphical Notation SBGN Standard None ready

Systems Biology Markup Language SBML Standard ready

Systems Biology Results Markup Language SBRML Standard None None ready