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OME

OME is committed to building and releasing high quality, open source, well-supported software for the scientific imaging community. Our tools should work regardless of location, processing environment or data type. The project’s foundation is an open metadata specification, the OME Data Model. This defines and describes the metadata elements and relationships that the project uses and supports.

This record is maintained by: joshmoore ORCID , sbesson ORCID

Record added: June 17, 2016, 3:27 p.m..
Record updated: March 3, 2020, 4:19 p.m. by joshmoore.

Homepage Reference

Taxonomic range

All

Knowledge Domains

Subjects

User-defined Tags

Metadata standardization

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Edits to 'https://fairsharing.org/bsg-c000021' by 'The FAIRsharing Team' at 15:51, 06 Feb 2017 (approved):

	'type' has been modified:
		Before: Organization
		After: Project

Edits to 'https://fairsharing.org/bsg-c000021' by 'joshmoore' at 14:52, 27 Nov 2018 (approved):

	'reference_url' has been modified:
		Before: 
		After: https://www.openmicroscopy.org/about/#standards

	'home_url' has been modified:
		Before: http://openmicroscopy.org
		After: https://openmicroscopy.org

	'description' has been modified:
		Before: <This collection is a work in progress. The description will be provided once the collection is complete>
		After: OME is committed to building and releasing high quality, open source, well-supported software for the scientific imaging community. Our tools should work regardless of location, processing environment or data type. The project?s foundation is an open metadata specification, the OME Data Model. This defines and describes the metadata elements and relationships that the project uses and supports.

Edits to 'https://fairsharing.org/bsg-c000021' by 'The FAIRsharing Team' at 14:36, 06 Feb 2019 (approved):

	'user_defined_tags' has been modified:
		Before:
		After:
			Metadata standardization
		Added:
			Metadata standardization
		Removed:

	'onto_disciplines' has been modified:
		Before:
		After:
			Bioinformatics
			Medical Informatics
		Added:
			Bioinformatics
			Medical Informatics
		Removed:

Edits to 'https://fairsharing.org/bsg-c000021' by 'The FAIRsharing Team' at 10:32, 21 Jan 2020 (approved):

	'standards' has been modified:
		Before:
			Open Microscopy Environment eXtensible Markup Language
			Open Microscopy Environment - Tagged Image File Format
		After:
			Open Microscopy Environment eXtensible Markup Language
			Open Microscopy Environment - Tagged Image File Format
			Open Microscopy Environment Ontology
		Added:
			Open Microscopy Environment Ontology
		Removed:

Edits to 'https://fairsharing.org/bsg-c000021' by 'joshmoore' at 16:19, 03 Mar 2020 (approved):

	'databases' has been modified:
		Before:
			OMERO
		After:
			OMERO
			Image Data Resource
		Added:
			Image Data Resource
		Removed:

4 records in view

Name	Abbreviation	Type	Subject	Domain	Taxonomy	Related Database	Related Standard	Related Policy	In Collection/Recommendation
Image Data Resource	IDR	Database	Biomedical Science Botany	Biological imaging High-content screen Super-resolution microscopy	Arabidopsis thaliana Drosophila Homo sapiens Mus musculus Saccharomyces cerevisiae Plus 2 more...	Ensembl SSBD SYSGRO ISPAMM BioImage Archive	GO CMPO OME-TIFF OME-XML EDMI-Functional Plus 1 more...	Open Research Data and Data Management Plans - Information for ERC grantees by the ERC Scientific Council SciData Data Policy eLife Data Policy	OME Euro-BioImaging
Open Microscopy Environment eXtensible Markup Language	OME-XML	Standard	Biology Microbiology	Biological imaging Experiment metadata Cell Data storage Image Plus 3 more...	All	IDR SSBD	OME-OWL OME-TIFF XML	None	OME FAIRDOM Community Standards
Open Microscopy Environment Ontology	OME-OWL	Standard	Biology	Biological imaging Electron microscopy Light microscopy Magnetic resonance imaging	All	IDR	OME-XML OWL OME-TIFF	None	OME
Open Microscopy Environment - Tagged Image File Format	OME-TIFF	Standard	Biology Biomedical Science	Biological imaging Resource metadata Image Microscopy	All	JCB DataViewer IDR CID Liverpool CCI OMERO NHM Data Portal Plus 1 more...	OME-XML OME-OWL	None	Cell Migration Standardisation Organisation OME

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