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Toxicology

Collection of FAIR resources related to Toxicology.

This record is maintained by: egonw ORCID

Record added: June 9, 2020, 11:43 a.m..
Record updated: June 30, 2021, 12:56 p.m. by The FAIRsharing Team.

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Edits to 'https://fairsharing.org/bsg-c000073' by 'egonw' at 14:03, 09 Jun 2020 (approved):

	'standards' has been modified:
		Before:
			MDL molfile Format
			Simplified Molecular Input Line Entry Specification Format
			Toxicology Data Markup Language
			Bioschemas
		After:
			Environment Ontology
			MDL molfile Format
			Simplified Molecular Input Line Entry Specification Format
			Exposure Ontology
			Toxicology Data Markup Language
			eNanoMapper Ontology
			Bioschemas
		Added:
			Environment Ontology
			Exposure Ontology
			eNanoMapper Ontology
		Removed:

Edits to 'https://fairsharing.org/bsg-c000073' by 'The FAIRsharing Team' at 11:00, 20 Jun 2020 (approved):

	'taxonomies' has been modified:
		Before:
			Not applicable
		After:
			All
		Added:
			All
		Removed:
			Not applicable

	'onto_disciplines' has been modified:
		Before:
		After:
			Toxicology
		Added:
			Toxicology
		Removed:

	'description' has been modified:
		Before: Collection of FAIR resource related to Toxicology.
		After: Collection of FAIR resources related to Toxicology.

Edits to 'https://fairsharing.org/bsg-c000073' by 'The FAIRsharing Team' at 12:56, 30 Jun 2021 (approved):

	'home_url' has been modified:
		Before: 
		After: https://github.com/bigcaT-UM/ELIXIR-Tox

12 records in view

Name	Abbreviation	Type	Subject	Domain	Taxonomy	Related Database	Related Standard	Related Policy	In Collection/Recommendation
Bioschemas	Bioschemas	Standard	Computer Science Life Science	Annotation	Not applicable	BioSD ChEMBL MINT Identifiers.org Central Registry Gene3D Plus 48 more...	Schema.org CWL RO-Crate	None	Toxicology Bioschemas Crosswalk of most used metadata schemes and guidelines for metadata interoperability
ChEMBL	ChEMBL	Database	Biochemistry Drug Discovery Genomics Medicinal Chemistry	Chemical structure Bioactivity Chemical entity Drug Genome Plus 2 more...	All	BindingDB GPCRdb Guide to Pharmacology PubChem Cellosaurus Plus 10 more...	ChEBI BTO CHEMINF UO BAO Plus 6 more...	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Advanced Genetics Plus 4 more...	Toxicology Data Citation Implementation EOSC-Life Bioschemas ELIXIR Core Data Resources and Deposition Databases Plus 1 more...
Comparative Toxicogenomics Database	CTD	Database	Anatomy Biomedical Science Comparative Genomics Environmental Science Systems Biology Plus 2 more...	Adverse Reaction Annotation Drug interaction Gene Ontology enrichment Gene expression data Plus 17 more...	Bos taurus Caenorhabditis elegans Canis lupus Danio rerio Drosophila Plus 5 more...	NCG Gene Wiki DrugBank Reactome PC Plus 12 more...	CL NCBITAXON DOID GO MESH Plus 4 more...	None	Toxicology Chemistry COVID-19 Resources RDA Covid-19 WG Resources
data.eNanoMapper.net	data.eNanoMapper.net	Database	Chemistry Health Science	Chemical entity Nanoparticle	Not applicable	EUON	ENM SMILES ERM Identifier RDF ISA-Tab	None	Chemistry Toxicology
eNanoMapper Ontology	ENM	Standard	Health Science	Chemical entity Nanoparticle	Not applicable	data.eNanoMapper.net NanoCommons Knowledge Base	CHEMINF BAO NPO BFO IAO	None	Toxicology Chemistry
Environment Ontology	ENVO	Standard	Ecology Environmental Science Epidemiology Life Science Nutritional Science Plus 1 more...	Environmental material Marine metagenome Microbiome	Algae Archaea Bacteria Eukaryota Fungi Plus 3 more...	GOLD Gramene MCDRP DataONE OBO Plus 3 more...	ChEBI OBO_REL PATO NCBITAXON MIxS - MIMARKS Plus 11 more...	Advanced Genetics SciData Data Policy	Toxicology Advanced Genetics Systems Medicine RDA Covid-19 WG Resources
European Union Observatory for Nanomaterials	EUON	Database	Chemistry Nanotechnology Physics	None	Not applicable	data.eNanoMapper.net	None	None	Toxicology
Exposure Ontology	ExO	Standard	Environmental Science Epigenetics Ontology and Terminology Toxicology	Disease Exposure	Homo sapiens	CTD OBO	CSEO	None	Toxicology
MDL molfile Format	MDL molfile Format	Standard	Chemistry Life Science	Molecular structure X-ray crystallography assay Molecular entity	All	Rhea SCRIPDB TTD, Therapeutic Target Database DART ChemSpider Plus 2 more...	SDF	None	Toxicology Chemistry ISO/CD 20691 Collection - DRAFT
PubChem	PubChem	Database	Epidemiology Life Science Virology	Molecular structure Assay Protein Small molecule Structure	All	ChEMBL WikiPathways CTD Guide to Pharmacology ChemIDplus Plus 16 more...	CHEMINF GO MIARE MESH NDFRT Plus 4 more...	PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 2 (for life sciences) Plus 22 more...	NIH-supported data repositories Toxicology Data Citation Implementation Open Science Prize Advanced Genetics Plus 2 more...
Simplified Molecular Input Line Entry Specification Format	SMILES	Standard	Chemistry Life Science	Molecular structure Molecular entity	All	BitterDB COD Nematode.net CCD Guide to Pharmacology Plus 9 more...	FAIR chemical structure template BpForms Grammar BcForms Grammar	None	Toxicology Metabolomics Standards and Databases H2020 Phenome and Metabolome aNalysis (PhenoMenal) Project ISO/CD 20691 Collection - DRAFT
Toxicology Data Markup Language	ToxML	Standard	Chemistry Life Science Toxicogenomics Toxicology	Chemical entity Toxicity	All	None	XML	None	Toxicology Chemistry RDA Covid-19 WG Resources

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