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Wheat Data Interoperability Guidelines
These recommendations have been prepared by members of the Wheat Data Interoperability Working Group (WG), one of the WGs of the Research Data Alliance and the only WG of the Agriculture Data Interoperability Interest Group. The group is coordinated by members of the Wheat Initiative, a global initiative that aims to reinforce synergies between bread and durum wheat national and international research programmes to increase food security, nutritional value and safety while taking into account societal demands for sustainable and resilient agricultural production systems.

This record is maintained by: ThomasLetellier 

Record added: Dec. 26, 2017, 2:36 p.m..
Record updated: May 7, 2018, 11:30 a.m. by ThomasLetellier.

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Wheat Data Interoperability Guidelines, Ontologies and User Cases. Recommendations from the RDA Wheat Data Interoperability Working Group

Dzalé Yeumo, Esther ; Fulss, Richard ; Alaux, Michael; Aubin, Sophie; Arnaud, Elizabeth; Baumann, Ute; Cooper, Laurel; Davey, Richard; Laporte, Marie-Angélique; Larmande, Pierre; Letellier, Thomas; Pommier, Cyril; Protonotarios, Vassilis; Shrestha, Rosemary; Subirats, Imma; Venkatesan, Aravind; Whan, Alex;

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16 records in view

Registry Name Abbreviation Type Subject Domain Taxonomy Related Database Related Standard Related Policy In Collection/Recommendation Status

Binary Alignment Map Format BAM Standard None ready
Crop Ontology CO Standard None ready
Darwin Core DwC Standard None ready

FASTQ Sequence and Sequence Quality Format FASTQ Sequence and Sequence Quality Format Standard None ready

Generic Feature Format Version 3 GFF3 Standard None ready

Genetic and Genomic Information System GnpIS Database None ready

GrainGenes, a Database for Triticeae and Avena GrainGenes Database None ready

Gramene: A curated, open-source, integrated data resource for comparative functional genomics in plants Gramene Database None ready

Investigation Study Assay Tabular ISA-Tab Standard ready

Minimum Information about Plant Phenotyping Experiment MIAPPE Standard None ready

Multi-Crop Passport Descriptors MCPD Standard None ready
Reference Sequence Annotation RSA Standard None
None None None ready

Resource Description Framework RDF Standard None
None ready

Sequence Read Archive SRA Database ready

The Triticeae Toolbox T3 Database None ready

Variant Call Format VCF Standard None None ready