Recommendation

BioMed Central

This recommendation houses all the databases and standards mentioned in the submission checklist for the BioMed Central stable of journals. The checklist itself is listed as a policy document in this collection.

This record is maintained by: AmyeKenall

This recommendation is taken from the following policy:

BioMed Central - Minimum Standards of Reporting Checklist.

Record updated: Dec. 19, 2016, 5:42 p.m. by The FAIRsharing Team.

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48 records in view

Name	Abbreviation	Type	Subject	Domain	Taxonomy	Related Database	Related Standard	Related Policy	In Collection/Recommendation
Addgene	Addgene	Database	Life Science	Bibliography Deoxyribonucleic acid Plasmid	All	dkNET	FASTA GenBank Sequence Format RRID	Springer Nature - Nature Medicine - Availability of Data and materials Nature Publishing Group - Nature Genetics - Availability of Data and materials Nature Publishing Group - Nature Chemical Biology - Availability of Data and materials Springer Nature - Nature Photonics - Availability of Data and materials eLife Data Policy Plus 11 more...	Data Citation Implementation eTRIKS Standards Starter Pack
ArrayExpress	ArrayExpress	Database	Functional Genomics	Chromatin immunoprecipitation - DNA microarray Chromatin immunoprecipitation - DNA sequencing DNA microarray Experiment metadata Gene expression data Plus 5 more...	All	BioSD Expression Atlas Bgee ENA GEO Plus 12 more...	MAGE-TAB EFO MIAME/Env MINSEQE MIAME Plus 3 more...	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy PLOS Recommended Repositories EMBO Recommended Databases and Data Standards Plus 51 more...	Data Citation Implementation DNA Microarray EOSC-Life ELIXIR Core Data Resources and Deposition Databases Advanced Genetics Plus 1 more...
Biological Magnetic Resonance Databank	BMRB	Database	Structural Biology	Protein structure Molecular entity Nuclear Magnetic Resonance (NMR) spectroscopy Nucleic acid Peptide Plus 3 more...	All	PDBe Protein Data Bank Japan RCSB PDB wwPDB	nmrCV PDB CCPN data model NMR-STAR PDBx/mmCIF Plus 1 more...	Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 PLOS Recommended Repositories Springer Nature Research Data Policy Type 2 (for life sciences) Plus 22 more...	Data Citation Implementation
caNanoLab	caNanoLab	Database	Biomedical Science Nanotechnology	Bioactivity Nanoparticle Structure	Homo sapiens Mus musculus	None	NPO	Elsevier's Data Policy PLOS Recommended Repositories Cell Press - Cell Metabolism - Information for Authors SciData Data Policy BioMed Central - Minimum Standards of Reporting Checklist Plus 9 more...	NIH-supported data repositories Data Citation Implementation
Coherent X-ray Imaging Data Bank	CXIDB	Database	Life Science	Molecular structure X-ray diffraction Imaging	All	None	CXI EDMI-Functional	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 14 more...	Data Citation Implementation
Database of genomic structural VARiation	dbVar	Database	Biomedical Science Life Science	Genetic polymorphism Genome	All	DGVa ClinVar DGV BovineMine	VarioML	Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 PLOS Recommended Repositories Cold Spring Harbor Lab Press - Genome Research Plus 37 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Advanced Genetics
~~Database of Genomic Variants Archive~~	~~DGVa~~	Database	Genomics	Genetic polymorphism Curated information Structure Sequence variant	All	ArrayExpress ENA EGA Ensembl dbVar Plus 2 more...	None	MNI Open Research UCL Child Open Health Research Springer Nature - Research Data Policies PLOS Recommended Repositories HRB Open Research Plus 25 more...	Data Citation Implementation Advanced Genetics
Database of Genotypes and Phenotypes	dbGaP	Database	Biomedical Science Epigenetics Life Science	Gene expression data Genetic polymorphism Genotype Phenotype	Homo sapiens	GWAS Central ImmPort BioSample NSRR exRNA Atlas Plus 1 more...	SRA-XML VCF DUO	NIH GWAS Sharing Policy IH Policy on sharing of model organisms for Biomedical Research Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 39 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Advanced Genetics RDA Covid-19 WG Resources
Database of Single Nucleotide Polymorphism	dbSNP	Database	Life Science	Genetic polymorphism Single nucleotide polymorphism Genome	Homo sapiens	PolymiRTS T1DBase GWAS Central EVA ClinVar Plus 5 more...	XML JSON	NIH GWAS Sharing Policy Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 PLOS Recommended Repositories Plus 38 more...	NIH-supported data repositories Data Citation Implementation National Child Development Study (UK) Open Science Prize Advanced Genetics
DNA Data Bank of Japan	DDBJ	Database	Bioinformatics Data Management Data Submission, Annotation and Curation Functional Genomics Genomics Plus 2 more...	Annotation DNA sequence data Sequence annotation Data storage Deoxyribonucleic acid Plus 4 more...	All	GenBank ENA NCBI Viral Genomes Resource NextDB JGA Plus 1 more...	NCBITAXON FASTA FASTQ Sequence and Sequence Quality Format GenBank Sequence Format INSDSeq Plus 1 more...	Elsevier's Data Policy Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 PLOS Recommended Repositories Plus 51 more...	RDA Covid-19 WG Resources Data Citation Implementation
Dryad	Dryad	Database	Engineering Science Humanities and Social Sciences Natural Science	Curated information Literature curation	All	GenBank TreeBase ORCID Registry DataONE FundRef Plus 1 more...	DataCite Metadata Schema Common Metadata Elements for Cataloging Biomedical Datasets Schema.org PLOSTHES DOI Plus 4 more...	Elsevier's Data Policy Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 PLOS Recommended Repositories Plus 33 more...	NIH-supported data repositories Data Citation Implementation BMJ - British Medical Journal General Repository Comparison National Transportation Data Preservation Network (NTDPN)
Electron Microscopy Data Bank	EMDB	Database	Biology Epidemiology Virology	Biological imaging X-ray diffraction Electron density map Electron microscopy Microscopy Plus 1 more...	All	CCD PDBe RCSB PDB EMPIAR EMDataResource	PDB PDBx/mmCIF	Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 PLOS Recommended Repositories EMBO Recommended Databases and Data Standards Plus 33 more...	Data Citation Implementation EOSC-Life ELIXIR Core Data Resources and Deposition Databases COVID-19 Resources RDA Covid-19 WG Resources
European Nucleotide Archive	ENA	Database	Bioinformatics Data Management Data Submission, Annotation and Curation Functional Genomics Genomics Plus 2 more...	Annotation DNA sequence data Genomic assembly Sequence annotation Data storage Plus 6 more...	All	GenBank BioSD DDBJ ArrayExpress Europe PMC Plus 14 more...	SRA-XML NCBITAXON MIASPPE ENA Sequence Flat File Format FASTA Plus 6 more...	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Plus 59 more...	Data Citation Implementation EOSC-Life ELIXIR Core Data Resources and Deposition Databases Advanced Genetics RDA Covid-19 WG Resources
European Variation Archive	EVA	Database	Biomedical Science Genetics Genomics	DNA structural variation Genetic polymorphism Genotype Sequencing Sequence variant	All	ENA EGA dbSNP UniProtKB DGVa Plus 4 more...	SO HGNC	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 26 more...	Data Citation Implementation EOSC-Life ELIXIR Core Data Resources and Deposition Databases RDA Covid-19 WG Resources
Experimental data repository for KInetic MOdels of biological SYStems	KiMoSys	Database	Life Science Metabolomics	Reaction data Enzyme Metabolite	All	None	CellML SBML	PLOS Recommended Repositories eLife Data Policy SciData Data Policy BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	Data Citation Implementation
FAIRsharing	FAIRsharing	Database	Agriculture Biomedical Science Earth Science Environmental Science Humanities Plus 2 more...	FAIR	All	None	Schema.org BioDBCore Bioschemas SRAO DOI Plus 2 more...	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy PLOS Recommended Repositories EMBO Recommended Databases and Data Standards Plus 13 more...	EOSC-Life Bioschemas ELIXIR Recommended Interoperability Resources ELIXIR UK node resources Advanced Genetics
figshare	figshare	Database	Data Management Data Visualization	Data storage Image	All	OSF ORCID Registry 4TU.ResearchData GRID Dimensions Plus 4 more...	DataCite Metadata Schema RDF Schema.org DC CERIF Plus 3 more...	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 32 more...	NIH-supported data repositories Data Citation Implementation General Repository Comparison
GenBank	GenBank	Database	Bioinformatics Data Management Data Submission, Annotation and Curation Epidemiology Functional Genomics Plus 4 more...	Annotation DNA sequence data Genomic assembly Nucleic acid sequence Data storage Plus 9 more...	All	DDBJ IMG/M NONCODE GENI-ACT GOLD Plus 12 more...	SRA-XML NCBITAXON GenBank Sequence Format FASTA FASTQ Sequence and Sequence Quality Format Plus 4 more...	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Plus 64 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Advanced Genetics COVID-19 Resources Plus 1 more...
Gene Expression Omnibus	GEO	Database	Epidemiology Life Science Virology	DNA microarray Gene expression data Genome	All	NONCODE Nematode.net Bgee ArrayExpress SMD Plus 21 more...	MINiML SOFT MIAME/Env MIAME FAANG metadata experiment specification standard	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Plus 61 more...	NIH-supported data repositories Data Citation Implementation DNA Microarray Open Science Prize Advanced Genetics Plus 3 more...
Giga Science Database	GigaDB	Database	Computational Biology Genetics Genomics Life Science Proteomics	Gene expression data Imaging Sequencing Software	All	DataCite	ISA-Tab NCBITAXON DataCite Metadata Schema Bioschemas	PLOS Recommended Repositories eLife Data Policy BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	Data Citation Implementation Bioschemas RDA Covid-19 WG Resources
Global Biodiversity Information Facility	GBIF	Database	Biodiversity Bioinformatics Life Science	Taxonomic classification	All	Scratchpads Brazilian Flora 2020 REFLORA ALA IPT - GBIF Australia Repository GBIF Spain IPT - GBIF Spain Repository Plus 30 more...	DwC TAPIR ABCD EML	PLOS Recommended Repositories Open Research Data and Data Management Plans - Information for ERC grantees by the ERC Scientific Council eLife Data Policy SciData Data Policy BioMed Central - Minimum Standards of Reporting Checklist Plus 1 more...	Data Citation Implementation Bioschemas Global Biodiversity Information Facility (GBIF) international open data infrastructure
HUGO Gene Nomenclature Committee	HGNC	Database	Life Science Ontology and Terminology	Gene name Gene	Homo sapiens	FlyBase STRING HPRD MGDD CRC Atlas Plus 11 more...	HGNC VGNC	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Advanced Genetics Plus 6 more...	Data Citation Implementation Advanced Genetics
IntAct molecular interaction database	IntAct	Database	Biology	Citation Experiment metadata Gene Ontology enrichment Gene name Protein domain Plus 5 more...	All	MINT Gene3D neXtProt APID Interactomes Reactome Plus 19 more...	ChEBI MIRO PSI-PAR XML MITAB GO Plus 5 more...	Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 PLOS Recommended Repositories EMBO Recommended Databases and Data Standards Plus 12 more...	Data Citation Implementation International Molecular Exchange Consortium (IMEx) EOSC-Life ELIXIR Core Data Resources and Deposition Databases COVID-19 Resources Plus 1 more...
International Neuroimaging Data-Sharing Initiative	INDI	Database	Biomedical Science Life Science	Diffusion tensor imaging Functional magnetic resonance imaging Brain imaging Phenotype	Homo sapiens	NITRC ABIDE	MIfMRI	Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 PLOS Recommended Repositories Springer Nature Research Data Policy Type 2 (for life sciences) Plus 7 more...	Open Science Prize Data Citation Implementation
MetaboLights	MTBLS	Database	Data Submission, Annotation and Curation Metabolomics Structural Biology	Biocuration Biological sample Chemical formula Chemical structure Mass spectrometry spectra Plus 9 more...	All	Rhea WikiPathways BRENDA OmicsDI DES-TOMATO	nmrCV ChEBI ISA-Tab PSI-MS CV BTO Plus 3 more...	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 18 more...	Metabolomics Standards and Databases Data Citation Implementation H2020 Phenome and Metabolome aNalysis (PhenoMenal) Project EOSC-Life ELIXIR Core Data Resources and Deposition Databases Plus 2 more...
MGnify	MGnify	Database	Biodiversity Biomedical Science Data Submission, Annotation and Curation Environmental Science Life Science Plus 3 more...	Annotation DNA sequence data Gene prediction Metagenome Sequence annotation Plus 5 more...	All Anopheles gambiae Arabidopsis thaliana Bos indicus Bos taurus Plus 6 more...	ENA	GO MIxS - MIGS/MIMS FASTA FASTQ Sequence and Sequence Quality Format MIxS	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 14 more...	Data Citation Implementation EOSC-Life ELIXIR Non-CDR and Non-Deposition Database RDA Covid-19 WG Resources
Minimum Information About a Microarray Experiment	MIAME	Standard	Life Science Transcriptomics	DNA microarray Experiment metadata Gene expression data Deoxyribonucleic acid Genome Plus 2 more...	All	BuG@Sbase ArrayExpress GermOnline GEO CEBS Plus 6 more...	MAGE-TAB ISA-Tab SOFT MINiML MIAME/Env Plus 9 more...	Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 EMBO Recommended Databases and Data Standards American Society for Clinical Investigation - Journal of Clinical Investigation - Information for Authors Plus 34 more...	National Child Development Study (UK) DNA Microarray FAIRDOM Community Standards Minimum Information for Biological and Biomedical Investigations RDA Covid-19 WG Resources
Minimum Information about a Molecular Interaction Experiment	MIMIx	Standard	Biochemistry Life Science Proteomics	Assay Chemical entity Deoxyribonucleic acid Interactome Lipid Plus 2 more...	Archaea Bacteria Eukaryota	IntAct MINT MatrixDB ProteoRed	PSI-MI CV MITAB PSI-MI XML MIAPE MIAPAR Plus 9 more...	Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 EMBO Recommended Databases and Data Standards Rockefeller University Press - Journal Of Cell Biology - Data Deposition Plus 6 more...	FAIRDOM Community Standards HUPO Proteomics Standards Initiative Minimum Information for Biological and Biomedical Investigations Chemistry
miRBase Sequence Database	miRBase	Database	Life Science	Crowdsourcing RNA sequence Gene Micro RNA Ribonucleic acid	All	PolymiRTS miRNEST FlyMine GREENC MirGeneDB Plus 4 more...	ENA Sequence Flat File Format FASTA	PLOS Recommended Repositories Cold Spring Harbor Lab Press - Genome Research eLife Data Policy BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist Plus 2 more...	Open Science Prize Data Citation Implementation
NCBI BioSample	BioSample	Database	Life Science	DNA structural variation Gene expression data Assay Cell line Genotype Plus 2 more...	All	GenBank GEO SRA dbGaP dkNET Plus 3 more...	BioProject XML Schema FAANG metadata sample specification standard FAANG metadata experiment specification standard FAANG metadata analysis specification	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Springer Nature - Nature Medicine - Availability of Data and materials Plus 16 more...	Data Citation Implementation Advanced Genetics RDA Covid-19 WG Resources
NCBI Trace Archives	NCBI Trace Archives	Database	Life Science	Multiple sequence alignment region	All	DDBJ Trace Archive	None	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 37 more...	Data Citation Implementation Advanced Genetics
NeuroMorpho.Org	NeuroMorpho.Org	Database	Life Science	Cell morphology Neuron	Metazoa	PCTD	ABA NIFSTD	Elsevier's Data Policy Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 PLOS Recommended Repositories Plus 9 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize
NeuroVault	NeuroVault	Database	Biomedical Science Life Science Neurobiology	Functional magnetic resonance imaging Brain imaging	Homo sapiens	None	NIDM Schema.org Compact Identifier Format	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Cell Press - Cell Metabolism - Information for Authors Plus 15 more...	Data Citation Implementation
Nucleic Acids Database	NDB	Database	Life Science	Nucleic acid sequence Deoxyribonucleic acid Ribonucleic acid	All	MINAS tpsic	RNAO PDB PDBx/mmCIF	EMBO Recommended Databases and Data Standards Rockefeller University Press - Journal Of Cell Biology - Data Deposition BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist Rockefeller University Press - Journal Of Experimental Medicine - Data Deposition	Data Citation Implementation
OpenNeuro	OpenNeuro	Database	Biomedical Science Life Science Neurobiology	Cognition Imaging Magnetic resonance imaging	Homo sapiens	None	BIDS	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 25 more...	Open Science Prize Data Citation Implementation
Open Science Framework	OSF	Database	Data Management	Cancer Data storage Study design	All	figshare ORCID Registry Mendeley Data DataCite DataverseNL	DataCite Metadata Schema DOI JSON Crossref Metadata Deposit Schema	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories HRB Open Research AAS Policy Plus 13 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Advanced Genetics General Repository Comparison
PANGAEA - Data Publisher for Earth and Environmental Science	PANGAEA	Database	Agriculture Atmospheric Science Biology Chemistry Earth Science Plus 8 more...	Marine environment	All	BacDive WRMC-BSRN APGC GTN-P meereisportal.de Data Portal Plus 2 more...	DataCite Metadata Schema Schema.org DC Micro B3 DwC Plus 4 more...	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy PLOS Recommended Repositories HRB Open Research Plus 16 more...	Data Citation Implementation
PlasmID	PlasmID	Database	Biomedical Science Life Science	RNA interference Cloning plasmid Deoxyribonucleic acid Mutation analysis Plasmid	Homo sapiens Mus musculus	None	None	eLife Data Policy BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	Data Citation Implementation
ProteomeXchange	ProteomeXchange	Database	Life Science Proteomics	None	All	PRIDE PeptideAtlas jPOSTrepo MassIVE iProX	MIAPE PRIDE XML Format MIAPE-MS MIAPE-MSI	Elsevier's Data Policy Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 PLOS Recommended Repositories Plus 11 more...	Data Citation Implementation
PRoteomics IDEntifications database	PRIDE	Database	Life Science Proteomics	Peptide identification Protein identification Curated information Peptide Protein	All	BioSD Expression Atlas Ensembl ProteomeXchange Cellosaurus Plus 6 more...	mzQuantML mzML HUPO-PSI TraML MIAPE OmicsDI XML format Plus 9 more...	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 34 more...	Data Citation Implementation EOSC-Life ELIXIR Core Data Resources and Deposition Databases Advanced Genetics
PubChem	PubChem	Database	Epidemiology Life Science Virology	Assay Protein Small molecule Structure	All	ChEMBL WikiPathways CTD Guide to Pharmacology ChemIDplus Plus 11 more...	CHEMINF GO MIARE MESH NDFRT Plus 2 more...	Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 PLOS Recommended Repositories Springer Nature Research Data Policy Type 2 (for life sciences) Plus 22 more...	NIH-supported data repositories Toxicology Data Citation Implementation Open Science Prize Advanced Genetics Plus 2 more...
Sequence Read Archive	SRA	Database	Epidemiology Life Science Virology	DNA sequence data Sequence alignment Nucleic acid sequence alignment Allele Gene Plus 2 more...	All	IMG/M GOLD ImmPort BioSample HWG Plus 14 more...	SRA-XML MIxS - MIMARKS MINSEQE FAANG metadata experiment specification standard	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 43 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Wheat Data Interoperability Guidelines Advanced Genetics Plus 2 more...
~~Springer Nature - Research Data Policies~~	None	Journal	Biomedical Science Environmental Science Life Science Medicine Preclinical Studies	Journal article Publication	All	GenBank COD DDBJ IntAct GenomeRNAi Plus 32 more...	MIAME MIMIx	Nature Publishing Group - Nature Genetics - Availability of Data and materials Nature Publishing Group - Nature Chemical Biology - Availability of Data and materials Springer Nature - Nature Photonics - Availability of Data and materials Nature Publishing Group - Nature Structural & Molecular Biology - Availability of Data and materials BioMed Central - Minimum Standards of Reporting Checklist Springer Nature - Nature Methods - Availability of Data and Materials Nature Publishing Group - Nature Biotechnology - Availability of Data and materials Springer Nature - Nature Nanotechology - Availability of Data and materials Nature Publishing Group - Nature Cell Biology - Availability of Data and materials Springer Nature - Nature - Availability of Data and materials Plus 5 more...	None
The Cambridge Structural Database	CSD	Database	Biochemistry Chemistry Life Science	Atomic coordinate Protein structure X-ray diffraction Structure	All	None	CIF	Elsevier's Data Policy Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 2 (for life sciences) Plus 22 more...	Data Citation Implementation Chemistry RDA Covid-19 WG Resources
The European Genome-phenome Archive	EGA	Database	Biomedical Science Genomics Life Science	DNA sequence data Genetic polymorphism Genome Genotype Phenotype	Homo sapiens	ENA EVA DGVa OmicsDI COVID-19 Data Portal Plus 1 more...	FASTQ Sequence and Sequence Quality Format BAM OmicsDI XML format MIxS Schema.org Plus 2 more...	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 29 more...	Data Citation Implementation National Child Development Study (UK) EOSC-Life Bioschemas ELIXIR Core Data Resources and Deposition Databases Plus 3 more...
TreeBase	TreeBase	Database	Life Science Phylogenetics Phylogenomics	Classification Taxonomic classification	All	Dryad	MIAPA Newick tree Format CDAO NeXML	The Royal Society - Data sharing and mining BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	Data Citation Implementation
UniProt Knowledgebase	UniProtKB	Database	Functional Genomics Life Science	Annotation Biocuration Function analysis Gene expression data Gene functional annotation Plus 9 more...	All	DAMPD LegumeIP MitoMiner Pfam ProtoNet Plus 86 more...	ChEBI ECO NCBITAXON GO FASTA Plus 12 more...	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Plus 48 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize International Molecular Exchange Consortium (IMEx) EOSC-Life Plus 5 more...
Worldwide Protein Data Bank	wwPDB	Database	Life Science Structural Biology	Protein structure Deoxyribonucleic acid Protein Ribonucleic acid	All	ProtoNet ccPDB Nematode.net PoSSuM MetalPDB Plus 21 more...	PDB PDBx/mmCIF	Elsevier's Data Policy Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 PLOS Recommended Repositories Plus 43 more...	RDA Covid-19 WG Resources Data Citation Implementation

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