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This is a non-exhaustive list of repositories that have already been approved for hosting data alongside an EMBO journal, Molecular Systems Biology, EMBO Molecular Medicine, or EMBO reports article. Large-scale datasets, sequences, atomic coordinates and computational models should be deposited in one of the relevant public databases prior to submission (provided private access is available at the database) and authors should include accession codes in the Materials & Methods section.

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Record added: March 1, 2016, 3:47 p.m..
Record updated: July 26, 2016, 1:56 p.m. by The FAIRsharing Team.

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32 records in view

Registry Name Abbreviation Type Domain Taxonomy Related Database Related Standard Related Policy In Collection/Recommendation Status

ArrayExpress ArrayExpress Database ready

A repository of mathematical models of biological and biomedical systems BioModels Database ready

CellML CellML Standard ready

Database of Genotypes and Phenotypes dbGaP Database ready

Database of Single Nucleotide Polymorphism dbSNP Database ready

The DNA Data Bank of Japan DDBJ Database ready

Database of Interacting Proteins DIP Database ready

The European Genome-phenome Archive EGA Database ready

Electron Microscopy Data Bank EMDB Database ready

European Nucleotide Archive ENA Database ready

GenBank GenBank Database ready

Gene Expression Omnibus GEO Database ready

Host Pathogen Interaction Database HPIDB Database ready

Interologous Interaction Database i2d Database ready

InnateDB InnateDB Database ready

IntAct molecular interaction database IntAct Database ready

Investigation Study Assay Tabular ISA-Tab Standard ready

JWS Online JWS Online Database ready

MatrixDB: Extracellular Matrix interactions database MatrixDB Database ready

Minimum Information About a Microarray Experiment MIAME Standard ready

Minimum Information About a Proteomics Experiment MIAPE Standard ready

Minimum Information about a Molecular Interaction Experiment MIMIx Standard ready

Minimal Information about a high throuput SEQuencing Experiment MINSEQE Standard ready

Minimal Information Required In the Annotation of Models MIRIAM Standard ready

MetaboLights MTBLS Database ready

mz Markup Language mzML Standard ready

Nucleic Acids Database NDB Database ready

PeptideAtlas PeptideAtlas Database ready

PRoteomics IDEntifications database PRIDE Database ready

Systems Biology Markup Language SBML Standard ready

UniProt Knowledgebase UniProtKB Database ready

Worldwide Protein Data Bank wwPDB Database ready