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Showing records 1 - 50 of 53.

Name	Abbreviation	Type	Subject	Domain	Taxonomy	Related Database	Related Standard	Related Policy	In Collection/Recommendation
Animals in Research: Reporting In Vivo Experiments	ARRIVE	Standard	Life Science	Animal research In vivo design	Animalia Metazoa	None	None	MNI Open Research UCL Child Open Health Research HRB Open Research American Society for Clinical Investigation - Journal of Clinical Investigation - Information for Authors AAS Policy Plus 13 more...	None
ArrayExpress	ArrayExpress	Database	Functional Genomics	Chromatin immunoprecipitation - DNA microarray Chromatin immunoprecipitation - DNA sequencing DNA microarray Experiment metadata Gene expression data Plus 5 more...	All	BioSD Expression Atlas Bgee ENA GEO Plus 11 more...	MAGE-TAB EFO MIAME/Env MINSEQE MIAME Plus 3 more...	MNI Open Research Elsevier's Data Policy PLOS Recommended Repositories UCL Child Open Health Research EMBO Recommended Databases and Data Standards Plus 50 more...	Data Citation Implementation DNA Microarray ELIXIR Core Data Resources and Deposition Databases EOSC-Life Resources Genetics & Genomics Next
BioSamples at the European Bioinformatics Institute	BioSD	Database	Biology	Biological sample Experiment metadata Disease Genotype Phenotype Plus 1 more...	All	ArrayExpress ENA PRIDE Cellosaurus	EFO ChEBI SampleTab BioProject XML Schema FAANG metadata sample specification standard Plus 5 more...	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	ELIXIR Core Data Resources and Deposition Databases EOSC-Life Resources
Case Reports	CARE	Standard	Biomedical Science	Patient care	Homo sapiens	None	CONSORT - OE	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Gates Open Research Data Guidelines Plus 4 more...	None
ChEMBL	ChEMBL	Database	Biochemistry Drug Discovery Medicinal Chemistry	Chemical structure Bioactivity Drug Small molecule	All	BindingDB Guide to Pharmacology PubChem Cellosaurus Open Targets Plus 6 more...	ChEBI BTO CHEMINF UO BAO Plus 5 more...	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy GGN Plus 4 more...	Data Citation Implementation ELIXIR Core Data Resources and Deposition Databases EOSC-Life Resources Genetics & Genomics Next
Coherent X-ray Imaging Data Bank	CXIDB	Database	Life Science	Molecular structure X-ray diffraction Imaging	All	None	CXI EDMI-Functional	MNI Open Research Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 14 more...	Data Citation Implementation
CONSOlidated standards of Reporting Trials	CONSORT	Standard	Biomedical Science Preclinical Studies	Data acquisition	Homo sapiens	None	COREQ CONSORT - OE CONSORT - UE TIDieR SPIRIT	MNI Open Research UCL Child Open Health Research HRB Open Research American Society for Clinical Investigation - Journal of Clinical Investigation - Information for Authors AAS Policy Plus 31 more...	BMJ - British Medical Journal
Crystallography Open Database	COD	Database	Chemistry	Molecular structure X-ray crystallography assay X-ray diffraction	All	None	SMILES	MNI Open Research Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 13 more...	Data Citation Implementation Chemistry
~~Database of Genomic Variants Archive~~	~~DGVa~~	Database	Genomics	Genetic polymorphism Curated information Structure Sequence variant	All	ArrayExpress ENA EGA Ensembl dbVar Plus 2 more...	None	MNI Open Research PLOS Recommended Repositories Springer Nature - Research Data Policies UCL Child Open Health Research HRB Open Research Plus 25 more...	Data Citation Implementation Genetics & Genomics Next
DataCite Metadata Schema	DataCite Metadata Schema	Standard	Life Science	Annotation Data retrieval Resource metadata Centrally registered identifier	All	PANGAEA Movebank Data Repository FAIRDOMHub ORCID Registry candat Plus 17 more...	Common Metadata Elements for Cataloging Biomedical Datasets DCTERMS ECRIN CR MD Standard OpenAIRE Guidelines for Data Archives	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy GGN Plus 3 more...	bioCADDIE Genetics & Genomics Next
Ensembl	Ensembl	Database	Biomedical Science Comparative Genomics Genomics	Gene prediction Genetic map Genome alignment Genome annotation Genomic assembly Plus 4 more...	Caenorhabditis elegans Chordata Drosophila melanogaster Saccharomyces cerevisiae	MitoMiner NONCODE Gene3D neXtProt WikiPathways Plus 54 more...	FASTA GTF GFF3 BAM VCF Plus 5 more...	MNI Open Research UCL Child Open Health Research HRB Open Research American Society for Clinical Investigation - Journal of Clinical Investigation - Information for Authors AAS Policy Plus 3 more...	ELIXIR Core Data Resources and Deposition Databases EOSC-Life Resources
European Nucleotide Archive	ENA	Database	Bioinformatics Data Management Data Submission, Annotation and Curation Functional Genomics Genomics Plus 2 more...	Annotation DNA sequence data Genomic assembly Amino acid sequence Sequence annotation Plus 6 more...	All	GenBank BioSD DDBJ ArrayExpress Europe PMC Plus 11 more...	SRA-XML NCBITAXON MIASPPE FASTA FASTQ Sequence and Sequence Quality Format Plus 4 more...	MNI Open Research Elsevier's Data Policy Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Plus 58 more...	Data Citation Implementation ELIXIR Core Data Resources and Deposition Databases EOSC-Life Resources Genetics & Genomics Next
European Variation Archive	EVA	Database	Biomedical Science Genetics Genomics	DNA structural variation Genetic polymorphism Genotype Sequencing Sequence variant	All	ENA EGA dbSNP UniProtKB DGVa Plus 4 more...	SO HUGO	MNI Open Research Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 26 more...	Data Citation Implementation ELIXIR Core Data Resources and Deposition Databases EOSC-Life Resources
Expression Atlas	Expression Atlas	Database	Proteomics Transcriptomics	Differential gene expression analysis Gene expression data RNA sequencing Gene expression	All	AnimalTFDB Gramene ArrayExpress PRIDE Open Targets Plus 3 more...	MAGE-TAB GO OmicsDI XML format EFO	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	ELIXIR Non-CDR and Non-Deposition Database
FAIRsharing	FAIRsharing	Database	Agriculture Biomedical Science Earth Science Environmental Science Humanities Plus 2 more...	FAIR	All	None	Schema.org BioDBCore Bioschemas SRAO DRAO Plus 2 more...	MNI Open Research Elsevier's Data Policy PLOS Recommended Repositories UCL Child Open Health Research EMBO Recommended Databases and Data Standards Plus 12 more...	ELIXIR Recommended Interoperability Resources ELIXIR UK node resources Genetics & Genomics Next
figshare	figshare	Database	Data Visualization	Image	All	OSF	Schema.org DOI	MNI Open Research Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 28 more...	Data Citation Implementation
FORCE11 Data Citation Principles	FORCE11 DC	Standard	Life Science	Citation	All	Zenodo Ag Data Commons Imperial College Research Data Repository	Compact Identifier Format Reporting guidelines for research resources	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy GGN Plus 7 more...	Genetics & Genomics Next
GenBank	GenBank	Database	Bioinformatics Data Management Data Submission, Annotation and Curation Functional Genomics Genomics Plus 2 more...	Annotation DNA sequence data Genomic assembly Nucleic acid sequence Data storage Plus 9 more...	All	DDBJ GENI-ACT IRD ENA VirHostNet Plus 4 more...	SRA-XML NCBITAXON GenBank Sequence Format FASTA FASTQ Sequence and Sequence Quality Format Plus 4 more...	MNI Open Research Elsevier's Data Policy Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Plus 62 more...	Open Science Prize NIH-supported data repositories Data Citation Implementation Genetics & Genomics Next
Gene Expression Omnibus	GEO	Database	Life Science	DNA microarray Gene expression data Genome	All	Nematode.net Bgee ArrayExpress SMD ImmPort Plus 14 more...	MIAME/Env MIAME SOFT FAANG metadata experiment specification standard MINiML	MNI Open Research Elsevier's Data Policy Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Plus 60 more...	Open Science Prize NIH-supported data repositories Data Citation Implementation DNA Microarray Genetics & Genomics Next
Gene Ontology Annotation Database	GOA	Database	Biology Life Science	Annotation Gene Ontology enrichment Gene Protein Protein-containing complex Plus 1 more...	All	neXtProt PomBase APID Interactomes UniProtKB MoonProt Plus 7 more...	ECO GO ReTO GAF 2.0 GAF 2.1	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	ELIXIR Non-CDR and Non-Deposition Database
Homologene	Homologene	Database	Life Science	Annotation Genome annotation Gene Genome	All	CCGD FlyMine MouseMine YeastMine BovineMine	None	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	None
HUGO Gene Nomenclature Committee	HGNC	Database	Life Science Ontology and Terminology	Gene name Gene	Homo sapiens	FlyBase STRING HPRD MGDD CRC Atlas Plus 9 more...	HUGO VGNC	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy GGN Plus 6 more...	Data Citation Implementation Genetics & Genomics Next
Integrated relational Enzyme database	IntEnz	Database	Bioinformatics Enzymology	Classification Enzyme Commission number Enzymatic reaction Enzyme	All	Rhea BRENDA ExplorEnz Enzyme Portal CP Plus 2 more...	ChEBI	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	ELIXIR Non-CDR and Non-Deposition Database
MEROPS	MEROPS	Database	Biomedical Science Life Science	DNA sequence data Nucleic acid sequence Protein domain Amino acid sequence Protein structure Plus 5 more...	All	None	FASTA	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	None
MetaboLights	MTBLS	Database	Data Submission, Annotation and Curation Metabolomics Structural Biology	Biocuration Biological sample Chemical formula Chemical structure Mass spectrometry spectra Plus 9 more...	All	Rhea WikiPathways BRENDA OmicsDI DES-TOMATO	nmrCV ChEBI ISA-Tab PSI-MS CV BTO Plus 3 more...	MNI Open Research Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 18 more...	Metabolomics Standards and Databases Data Citation Implementation H2020 Phenome and Metabolome aNalysis (PhenoMenal) Project ELIXIR Core Data Resources and Deposition Databases EOSC-Life Resources Plus 1 more...
MGnify	MGnify	Database	Biodiversity Biomedical Science Data Submission, Annotation and Curation Environmental Science Life Science Plus 3 more...	Annotation DNA sequence data Gene prediction Metagenome Sequence annotation Plus 5 more...	All Anopheles gambiae Arabidopsis thaliana Bos indicus Bos taurus Plus 6 more...	ENA	MIxS - MIGS/MIMS FASTA FASTQ Sequence and Sequence Quality Format MIxS GO	MNI Open Research Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 14 more...	Data Citation Implementation ELIXIR Non-CDR and Non-Deposition Database
National Addiction & HIV Data Archive Program (NAHDAP)	NAHDAP	Database	Biomedical Science	Addiction Disease Drug	Homo sapiens Human immunodeficiency virus	None	None	MNI Open Research PLOS Recommended Repositories UCL Child Open Health Research HRB Open Research AAS Policy Plus 5 more...	Open Science Prize NIH-supported data repositories Data Citation Implementation
NCBI BioProject	BioProject	Database	Life Science	Annotation Sequencing	All	None	BioProject XML Schema	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy GGN Plus 3 more...	Genetics & Genomics Next
NCBI BioSample	BioSample	Database	Life Science	DNA structural variation Gene expression data Sequence Assay Cell line Plus 2 more...	All	GenBank GEO SRA dbGaP dkNET Plus 3 more...	BioProject XML Schema FAANG metadata sample specification standard FAANG metadata experiment specification standard FAANG metadata analysis specification	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Nature Publishing Group - Nature Medicine - Availability of Data and materials Plus 15 more...	Data Citation Implementation Genetics & Genomics Next
NCBI Gene	Gene	Database	Life Science	Deoxyribonucleic acid Gene Genome	All	WikiPathways CTD ImmPort Wikidata	GO FASTA	MNI Open Research UCL Child Open Health Research HRB Open Research American Society for Clinical Investigation - Journal of Clinical Investigation - Information for Authors AAS Policy Plus 4 more...	Genetics & Genomics Next
NCBI Probe Database	ProbeDB	Database	Life Science	Gene expression data Genetic polymorphism Oligonucleotide probe annotation Polymerase chain reaction primers Nucleotide	All	None	None	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy GGN Plus 3 more...	Genetics & Genomics Next
NCBI Trace Archives	NCBI Trace Archives	Database	Life Science	Multiple sequence alignment Sequence	All	None	None	MNI Open Research Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 35 more...	Data Citation Implementation Genetics & Genomics Next
NCBI Viral genomes	NCBI Viral genomes	Database	Life Science	Viral genome Deoxyribonucleic acid Genome Ribonucleic acid	Viruses	VirHostNet	FASTA	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy GGN Plus 3 more...	Genetics & Genomics Next
NeuroVault	NeuroVault	Database	Biomedical Science Life Science Neurobiology	Functional magnetic resonance imaging Brain imaging	Homo sapiens	None	NIDM Compact Identifier Format Schema.org	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Cell Press - Cell Metabolism - Information for Authors Plus 15 more...	Data Citation Implementation
Online Mendelian Inheritance in Animals	OMIA	Database	Life Science	Classification Gene Phenotype	Metazoa	None	None	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Gates Open Research Data Guidelines Plus 3 more...	None
OpenNeuro	OpenNeuro	Database	Biomedical Science Life Science Neurobiology	Cognition Imaging Magnetic resonance imaging	Homo sapiens	None	BIDS	MNI Open Research Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 25 more...	Open Science Prize NIH-supported data repositories Data Citation Implementation
Open Science Framework	OSF	Database	Life Science Psychology	Cancer Data storage Study design	All	figshare Mendeley Data DataverseNL	None	MNI Open Research PLOS Recommended Repositories UCL Child Open Health Research HRB Open Research AAS Policy Plus 10 more...	Open Science Prize Data Citation Implementation Genetics & Genomics Next
PANGAEA - Data Publisher for Earth and Environmental Science	PANGAEA	Database	Agriculture Atmospheric Science Biology Chemistry Earth Science Plus 8 more...	Marine environment	All	BacDive	DataCite Metadata Schema Micro B3 Schema.org DC DwC Plus 3 more...	MNI Open Research Elsevier's Data Policy PLOS Recommended Repositories UCL Child Open Health Research HRB Open Research Plus 16 more...	Data Citation Implementation
Pfam	Pfam	Database	Biology	Biocuration Evolution Function analysis Hidden Markov model Multiple sequence alignment Plus 10 more...	All	AnimalTFDB IDEAL PINA ProtoNet SMART Plus 24 more...	FASTA HMMER Profile File Format Stockholm Multiple Alignment Format GO NCBITAXON	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	ELIXIR Non-CDR and Non-Deposition Database
Preferred Reporting Items for Systematic reviews and Meta-Analyses	PRISMA	Standard	Biomedical Science Preclinical Studies	Data transformation Systematic review	Homo sapiens	None	None	MNI Open Research UCL Child Open Health Research HRB Open Research American Society for Clinical Investigation - Journal of Clinical Investigation - Information for Authors AAS Policy Plus 11 more...	BMJ - British Medical Journal
PRINTS	PRINTS	Database	Life Science	Binding motif Protein domain Protein	All	ProtoNet PlantTFDB InterPro UniProtKB SPRINT Plus 1 more...	None	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	None
PROSITE	PROSITE	Database	Life Science	Protein domain Protein identification Functional domain Protein Structure	All	ProtoNet PlantTFDB InterPro HAMAP Genome Properties	FASTA	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	ELIXIR Non-CDR and Non-Deposition Database
Protein Data Bank in Europe	PDBe	Database	Bioinformatics Structural Biology	Drug structure Protein structure X-ray diffraction Deoxyribonucleic acid Electron density map Plus 5 more...	All	2P2Idb SNAPPI-DB CCD Europe PMC PDBsum Plus 19 more...	Bioschemas PDBx/mmCIF PDB ChEBI GO	MNI Open Research Elsevier's Data Policy UCL Child Open Health Research HRB Open Research AAS Policy Plus 17 more...	ELIXIR Core Data Resources and Deposition Databases EOSC-Life Resources
PRoteomics IDEntifications database	PRIDE	Database	Life Science Proteomics	Peptide identification Protein identification Curated information Peptide Protein	All	BioSD Expression Atlas Ensembl ProteomeXchange Cellosaurus Plus 4 more...	mzQuantML mzML HUPO-PSI TraML MIAPE OmicsDI XML format Plus 9 more...	MNI Open Research Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 33 more...	Data Citation Implementation ELIXIR Core Data Resources and Deposition Databases EOSC-Life Resources Genetics & Genomics Next
RCSB Protein Data Bank	RCSB PDB	Database	Biomedical Science Life Science	Deoxyribonucleic acid Protein Ribonucleic acid Structure	All	MINAS 2P2Idb MODOMICS IRD PDBe Plus 15 more...	PDB PDBx/mmCIF	MNI Open Research Elsevier's Data Policy UCL Child Open Health Research HRB Open Research AAS Policy Plus 7 more...	Open Science Prize NIH-supported data repositories Data Citation Implementation
Reactome - a curated knowledgebase of biological pathways	Reactome	Database	Life Science	Drug interaction Protein interaction Reaction data Biological regulation Curated information Plus 5 more...	All	IntAct Rhea WikiPathways CTD APID Interactomes Plus 20 more...	BioPAX ChEBI SBGN MITAB GO Plus 6 more...	MNI Open Research UCL Child Open Health Research HRB Open Research Cold Spring Harbor Lab Press - Genome Research AAS Policy Plus 4 more...	ELIXIR Non-CDR and Non-Deposition Database
Sequence Read Archive	SRA	Database	Life Science	DNA sequence data Sequence Sequence alignment Nucleic acid sequence alignment Allele Plus 2 more...	All	ImmPort BioSample HWG IPA BIP Plus 8 more...	SRA-XML FAANG metadata experiment specification standard MINSEQE MIxS - MIMARKS	MNI Open Research Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 42 more...	Open Science Prize NIH-supported data repositories Data Citation Implementation Wheat Data Interoperability Guidelines Genetics & Genomics Next
The Cancer Imaging Archive	TCIA	Database	Artificial Intelligence Biomedical Science Digital Image Processing Oncology Radiology	Machine learning Cancer Histology Image Imaging	Homo sapiens Mus musculus	TCGA	DICOM	MNI Open Research Elsevier's Data Policy PLOS Recommended Repositories UCL Child Open Health Research HRB Open Research Plus 7 more...	Open Science Prize NIH-supported data repositories Data Citation Implementation
The European Genome-phenome Archive	EGA	Database	Biomedical Science Genomics Life Science	DNA sequence data Genetic polymorphism Genome Genotype Phenotype	Homo sapiens	ENA EVA DGVa OmicsDI	FASTQ Sequence and Sequence Quality Format BAM OmicsDI XML format MIxS Schema.org Plus 2 more...	MNI Open Research Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 28 more...	Data Citation Implementation National Child Development Study (UK) ELIXIR Core Data Resources and Deposition Databases EOSC-Life Resources Genetics & Genomics Next
The Knowledge Network for Biocomplexity	KNB	Database	Earth Science Ecology Environmental Science	Centrally registered identifier	All	None	EML DOI OBOE	MNI Open Research PLOS Recommended Repositories UCL Child Open Health Research HRB Open Research AAS Policy Plus 4 more...	None

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