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Showing records 1 - 50 of 53.

Name	Abbreviation	Type	Subject	Domain	Taxonomy	Related Database	Related Standard	Related Policy	In Collection/Recommendation
Animals in Research: Reporting In Vivo Experiments	ARRIVE	Standard	Life Sciences	Animal research In vivo design	Animalia Metazoa	None	None	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Cell Press - Neuron - Information for Authors Plus 12 more...	None
ArrayExpress	ArrayExpress	Database	Life Sciences	Chromatin immunoprecipitation - DNA microarray Chromatin immunoprecipitation - DNA sequencing DNA microarray Gene expression data Genotyping Plus 3 more...	All	BioSD Expression Atlas Bgee SMD DGVA Plus 6 more...	MAGE-TAB EFO MIAME/Env MINSEQE MIAME Plus 2 more...	UCL Child Open Health Research EMBO Recommended Databases and Data Standards HRB Open Research PLOS Recommended Repositories MNI Open Research Plus 47 more...	Data Citation Implementation DNA Microarray ELIXIR Core Data Resources and Deposition Databases Genetics & Genomics Next
BioSamples at the European Bioinformatics Institute	BioSD	Database	Life Sciences	Biological sample annotation	All	ArrayExpress ENA PRIDE	EFO SampleTab BioProject XML Schema FAANG metadata sample specification standard FAANG metadata experiment specification standard Plus 1 more...	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	ELIXIR Core Data Resources and Deposition Databases
Case Reports	CARE	Standard	Biomedical Science	Patient care	Homo sapiens	None	CONSORT - OE	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 4 more...	None
ChEMBL	ChEMBL	Database	Biochemistry Drug Discovery Medicinal Chemistry	Chemical structure Bioactivity Drug Small molecule	Not applicable	Guide to Pharmacology CP TargetMine WITHDRAWN	CHEBI	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy SciData Data Policy Plus 3 more...	Data Citation Implementation ELIXIR Core Data Resources and Deposition Databases Genetics & Genomics Next
Coherent X-ray Imaging Data Bank	CXIDB	Database	Life Sciences	Molecular structure X-ray diffraction Imaging	All	None	CXI EDMI-Functional	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research HRB Open Research Plus 13 more...	Data Citation Implementation
CONSOlidated standards of Reporting Trials	CONSORT	Standard	Biomedical Science Biomedical Science Preclinical and Clinical Studies	Data acquisition	Homo sapiens	None	COREQ CONSORT - OE CONSORT - UE TIDieR SPIRIT	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Springer Nature - Nature Photonics - Availability of Data and materials Plus 28 more...	BMJ - British Medical Journal
Crystallography Open Database	COD	Database	None	None	None	None	None	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research HRB Open Research Plus 12 more...	Data Citation Implementation Chemistry
Database of Genomic Variants Archive	DGVA	Database	Genomics Life Sciences	Genetic polymorphism Curated information Structure Sequence variant	All	ArrayExpress ENA EGA Ensembl dbVar Plus 1 more...	None	Springer Nature - Research Data Policies UCL Child Open Health Research HRB Open Research PLOS Recommended Repositories MNI Open Research Plus 24 more...	Data Citation Implementation Genetics & Genomics Next
DataCite Metadata Schema	DataCite Metadata Schema	Standard	Life Sciences	Annotation Data retrieval Resource metadata Centrally registered identifier	All	PANGAEA Movebank Data Repository FAIRDOMHub ORCID Registry candat Plus 9 more...	Common Metadata Elements for Cataloging Biomedical Datasets OpenAIRE Guidelines for Data Archives DCTERMS	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	bioCADDIE Genetics & Genomics Next
Ensembl	Ensembl	Database	Biomedical Science Life Sciences	Gene prediction Genome alignment Genome annotation Genomic assembly Genome visualization Plus 2 more...	Caenorhabditis elegans Chordata Drosophila melanogaster Saccharomyces cerevisiae	MitoMiner NONCODE Gene3D neXtProt WikiPathways Plus 50 more...	FASTA GTF GFF3 BAM VCF Plus 5 more...	American Society for Clinical Investigation - Journal of Clinical Investigation - Information for Authors UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Plus 3 more...	ELIXIR Core Data Resources and Deposition Databases
European Nucleotide Archive	ENA	Database	Bioinformatics Data Management Functional Genomics Genomics Life Sciences Plus 2 more...	Annotation Amino acid sequence Deoxyribonucleic acid Histone Nucleotide Plus 2 more...	All	GenBank BioSD DDBJ Europe PMC EGA Plus 5 more...	SRA-XML NCBITAXON MIASPPE FASTA FASTQ Sequence and Sequence Quality Format Plus 4 more...	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research EMBO Recommended Databases and Data Standards Plus 53 more...	Data Citation Implementation ELIXIR Core Data Resources and Deposition Databases Genetics & Genomics Next
European Variation Archive	EVA	Database	Biomedical Science Genetics Genomics Life Sciences	DNA structural variation Genetic polymorphism Genotype Sequencing	All	ENA EGA dbSNP UniProtKB ClinVar Plus 2 more...	SO HUGO	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research HRB Open Research Plus 25 more...	Data Citation Implementation ELIXIR Core Data Resources and Deposition Databases
Expression Atlas	Expression Atlas	Database	Life Sciences Proteomics	Differential gene expression analysis Gene expression data RNA sequencing	All	AnimalTFDB ArrayExpress Open Targets OmicsDI CP Plus 1 more...	EFO GO OmicsDI XML format	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	ELIXIR Non-CDR and Non-Deposition Database
FAIRsharing	FAIRsharing	Database	Agriculture Biomedical Science Earth Sciences Environmental Sciences Humanities Plus 2 more...	None	All	None	Schema.org BioDBCore Bioschemas SRAO DRAO Plus 2 more...	UCL Child Open Health Research EMBO Recommended Databases and Data Standards HRB Open Research PLOS Recommended Repositories MNI Open Research Plus 10 more...	ELIXIR UK node resources Genetics & Genomics Next
figshare	figshare	Database	Data visualization	Image	All	OSF	Schema.org DOI	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research HRB Open Research Plus 26 more...	Data Citation Implementation
FORCE11 Data Citation Principles	FORCE11 DC	Standard	Life Sciences	Citation	All	Zenodo Ag Data Commons Imperial College Research Data Repository	Compact Identifier Format Reporting guidelines for research resources	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 6 more...	Genetics & Genomics Next
GenBank	GenBank	Database	Life Sciences	DNA sequence data Nucleic acid sequence Disease Gene Genome	All	DDBJ GENI-ACT IRD ENA VirHostNet Plus 3 more...	SRA-XML NCBITAXON GenBank Sequence Format FASTA FASTQ Sequence and Sequence Quality Format Plus 4 more...	American Society for Clinical Investigation - Journal of Clinical Investigation - Information for Authors Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research Plus 58 more...	Data Citation Implementation Open Science Prize NIH-supported data repositories Genetics & Genomics Next
Gene Expression Omnibus	GEO	Database	Life Sciences	DNA microarray Gene expression data Genome	All	Nematode.net Bgee SMD ImmPort BioSample Plus 7 more...	MINiML SOFT MIAME/Env MIAME	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research EMBO Recommended Databases and Data Standards Plus 56 more...	Data Citation Implementation Open Science Prize NIH-supported data repositories DNA Microarray Genetics & Genomics Next
Gene Ontology Annotation	GOA	Database	Life Sciences	Gene Ontology enrichment Gene Protein	All	neXtProt PomBase APID Interactomes MoonProt HWG Plus 5 more...	ECO GO GAF 2.0 GAF 2.1	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	ELIXIR Non-CDR and Non-Deposition Database
Homologene	Homologene	Database	Life Sciences	Annotation Genome annotation Gene Genome	All	CCGD FlyMine MouseMine YeastMine BovineMine	None	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	None
HUGO Gene Nomenclature Committee	HGNC	Database	Life Sciences Ontology and Terminology	Gene name Gene	Homo sapiens	FlyBase STRING HPRD MGDD CRC Atlas Plus 5 more...	None	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 4 more...	Data Citation Implementation Genetics & Genomics Next
Integrated relational Enzyme database	IntEnz	Database	Life Sciences	Classification Enzyme Commission number Enzyme Enzymatic reaction Enzyme	All	Rhea BRENDA ExplorEnz CP ENZYME	CHEBI	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	ELIXIR Non-CDR and Non-Deposition Database
MEROPS	MEROPS	Database	Biomedical Science Life Sciences	DNA sequence data Enzyme Nucleic acid sequence Protein domain Amino acid sequence Plus 5 more...	All	None	FASTA	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	None
MetaboLights	MTBLS	Database	Data Submission, Annotation and Curation Life Sciences Metabolomics	Biocuration Biological sample Chemical formula Chemical structure Mass spectrometry spectra Plus 9 more...	All	Rhea WikiPathways BRENDA OmicsDI	nmrCV CHEBI BTO ISA-Tab PSI-MS CV Plus 3 more...	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research EMBO Recommended Databases and Data Standards Plus 16 more...	Metabolomics Standards and Databases Data Citation Implementation H2020 Phenome and Metabolome aNalysis (PhenoMenal) Project ELIXIR Core Data Resources and Deposition Databases Genetics & Genomics Next
MGnify	MGnify	Database	Biodiversity Biomedical Science Data Submission, Annotation and Curation Environmental Sciences Life Sciences Plus 3 more...	Annotation DNA sequence data Gene prediction Metagenome Sequence annotation Plus 5 more...	All Anopheles gambiae Arabidopsis thaliana Bos indicus Bos taurus Plus 6 more...	ENA	GO MIxS - MIGS/MIMS FASTA FASTQ Sequence and Sequence Quality Format MIxS	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research HRB Open Research Plus 13 more...	Data Citation Implementation ELIXIR Non-CDR and Non-Deposition Database
National Addiction & HIV Data Archive Program (NAHDAP)	NAHDAP	Database	Biomedical Science	addiction Disease Drug	Homo sapiens Human immunodeficiency virus	None	None	UCL Child Open Health Research HRB Open Research PLOS Recommended Repositories MNI Open Research AAS Policy Plus 4 more...	Data Citation Implementation Open Science Prize NIH-supported data repositories
NCBI BioProject	BioProject	Database	Life Sciences	Annotation Sequencing	All	None	BioProject XML Schema	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	Genetics & Genomics Next
NCBI BioSample	BioSample	Database	Life Sciences	DNA structural variation Gene expression data Sequence Assay Cell line Plus 2 more...	All	GenBank GEO SRA dbGaP ENCODE Plus 1 more...	BioProject XML Schema FAANG metadata sample specification standard FAANG metadata experiment specification standard	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Springer Nature - Nature Photonics - Availability of Data and materials Plus 12 more...	Data Citation Implementation Genetics & Genomics Next
NCBI Gene	Gene	Database	Life Sciences	Deoxyribonucleic acid Gene Genome	All	WikiPathways CTD ImmPort Wikidata	GO FASTA	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	Genetics & Genomics Next
NCBI Probe Database	ProbeDB	Database	Life Sciences	Gene expression data Genetic polymorphism Oligonucleotide probe annotation Polymerase chain reaction primers Nucleotide	All	None	None	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	Genetics & Genomics Next
NCBI Trace Archives	NCBI Trace Archives	Database	Life Sciences	Multiple sequence alignment Sequence	All	None	None	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research HRB Open Research Plus 33 more...	Data Citation Implementation Genetics & Genomics Next
NCBI Viral genomes	NCBI Viral genomes	Database	Life Sciences	Deoxyribonucleic acid Genome Ribonucleic acid Viral genome	Viruses	VirHostNet	FASTA	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	Genetics & Genomics Next
NeuroVault	NeuroVault	Database	Biomedical Science Life Sciences Neurobiology	Functional magnetic resonance imaging Neuroimaging	Homo sapiens	None	NIDM	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Cell Press - Neuron - Information for Authors Plus 15 more...	Data Citation Implementation
Online Mendelian Inheritance in Animals	OMIA	Database	Life Sciences	Classification Gene Phenotype	Metazoa	None	None	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 3 more...	None
OpenNeuro	OpenNeuro	Database	Biomedical Science Life Sciences Neurobiology	Cognition Imaging Magnetic resonance imaging	Homo sapiens	None	BIDS	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research HRB Open Research Plus 24 more...	Data Citation Implementation Open Science Prize NIH-supported data repositories
Open Science Framework	OSF	Database	Life Sciences Psychology	Cancer Data storage Study design	All	figshare Mendeley Data DataverseNL	None	UCL Child Open Health Research HRB Open Research PLOS Recommended Repositories MNI Open Research AAS Policy Plus 8 more...	Data Citation Implementation Open Science Prize Genetics & Genomics Next
PANGAEA - Data Publisher for Earth and Environmental Science	PANGAEA	Database	Agriculture Atmospheric Science Biology Chemistry Chemistry Plus 9 more...	Marine environment	All	BacDive	DataCite Metadata Schema Micro B3 Schema.org DC DwC Plus 3 more...	UCL Child Open Health Research HRB Open Research PLOS Recommended Repositories MNI Open Research Elsevier Data Policy Plus 13 more...	Data Citation Implementation
Pfam	Pfam	Database	Life Sciences	Biocuration Biological evolution Function analysis Hidden Markov model Multiple sequence alignment Plus 10 more...	All	AnimalTFDB IDEAL PINA ProtoNet SMART Plus 21 more...	GO NCBITAXON FASTA HMMER Profile File Format Stockholm Multiple Alignment Format	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	ELIXIR Non-CDR and Non-Deposition Database
Preferred Reporting Items for Systematic reviews and Meta-Analyses	PRISMA	Standard	Biomedical Science Preclinical and Clinical Studies	Data transformation Systematic review	Homo sapiens	None	None	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 10 more...	BMJ - British Medical Journal
PRINTS	PRINTS	Database	Life Sciences	Binding motif Protein domain Protein	All	ProtoNet PlantTFDB InterPro UniProtKB SPRINT Plus 1 more...	None	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	None
PROSITE	PROSITE	Database	Life Sciences	Protein domain Protein identification functional domain Protein Structure	All	ProtoNet PlantTFDB InterPro HAMAP Genome Properties	FASTA	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Gates Open Research Data Guidelines Plus 2 more...	ELIXIR Non-CDR and Non-Deposition Database
Protein Data Bank in Europe	PDBe	Database	Bioinformatics Life Sciences	Drug structure Protein structure X-ray diffraction Deoxyribonucleic acid Electron density map Plus 5 more...	All	2P2Idb SNAPPI-DB CCD Europe PMC PDBsum Plus 14 more...	CHEBI GO PDB PDBx/mmCIF Bioschemas	UCL Child Open Health Research HRB Open Research MNI Open Research Elsevier Data Policy AAS Policy Plus 16 more...	ELIXIR Core Data Resources and Deposition Databases
PRoteomics IDEntifications database	PRIDE	Database	Life Sciences Proteomics	Peptide identification Protein identification Curated information Peptide Protein	All	BioSD Ensembl ProteomeXchange jPOSTrepo OmicsDI Plus 2 more...	mzQuantML mzML HUPO-PSI TraML MIAPE OmicsDI XML format Plus 9 more...	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research EMBO Recommended Databases and Data Standards Plus 29 more...	Data Citation Implementation ELIXIR Core Data Resources and Deposition Databases Genetics & Genomics Next
RCSB Protein Data Bank	RCSB PDB	Database	Biomedical Science Life Sciences	Deoxyribonucleic acid Protein Ribonucleic acid Structure	All	MINAS 2P2Idb MODOMICS IRD PDBe Plus 14 more...	PDB PDBx/mmCIF	UCL Child Open Health Research HRB Open Research MNI Open Research Elsevier Data Policy AAS Policy Plus 7 more...	Data Citation Implementation Open Science Prize NIH-supported data repositories
Reactome - a curated knowledgebase of biological pathways	Reactome	Database	Life Sciences	Drug interaction Protein interaction Reaction data Biological regulation Curated information Plus 5 more...	All	IntAct Rhea WikiPathways CTD APID Interactomes Plus 17 more...	BioPAX CHEBI SBGN MITAB GO Plus 5 more...	UCL Child Open Health Research HRB Open Research MNI Open Research AAS Policy Cold Spring Harbor Lab Press - Genome Research Plus 4 more...	ELIXIR Non-CDR and Non-Deposition Database
Sequence Read Archive	SRA	Database	Life Sciences	DNA sequence data Sequence Sequence alignment Nucleic acid sequence alignment Allele Plus 2 more...	All	ImmPort BioSample HWG IPA BIP Plus 6 more...	SRA-XML MIxS - MIMARKS MINSEQE	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research HRB Open Research Plus 40 more...	Data Citation Implementation Open Science Prize NIH-supported data repositories Wheat Data Interoperability Guidelines Genetics & Genomics Next
The Cancer Imaging Archive	TCIA	Database	Biomedical Science Oncology Radiology	Image Cancer Imaging	Homo sapiens	TCGA	DICOM	UCL Child Open Health Research HRB Open Research PLOS Recommended Repositories MNI Open Research Elsevier Data Policy Plus 6 more...	Data Citation Implementation Open Science Prize NIH-supported data repositories
The European Genome-phenome Archive	EGA	Database	Biomedical Science Genomics Life Sciences	DNA sequence data Genetic polymorphism Genome Genotype Phenotype	Homo sapiens	ENA EVA DGVA OmicsDI	FASTQ Sequence and Sequence Quality Format BAM OmicsDI XML format MIxS Schema.org Plus 1 more...	Springer Nature Research Data Policy Type 4 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 1 UCL Child Open Health Research EMBO Recommended Databases and Data Standards Plus 26 more...	Data Citation Implementation National Child Development Study (UK) ELIXIR Core Data Resources and Deposition Databases Genetics & Genomics Next
The Knowledge Network for Biocomplexity	KNB	Database	Earth Sciences Ecology Environmental Sciences	None	All	None	OBOE EML	UCL Child Open Health Research HRB Open Research PLOS Recommended Repositories MNI Open Research AAS Policy Plus 4 more...	None

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