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Recommendation

GigaScience

This recommendation houses all the databases and standards mentioned in the submission checklist for the OUP journal GigaScience. The checklist itself is listed as a policy document in this recommendation.

This record is maintained by: GigaScience

This recommendation is taken from the following policy:

GigaScience - Minimum Standards of Reporting Checklist.

Record added: Dec. 16, 2016, 1:23 p.m..
Record updated: Nov. 28, 2017, 10:40 a.m. by The FAIRsharing Team.

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Edits to 'https://fairsharing.org/bsg-c000036' by 'The FAIRsharing Team' at 17:43, 19 Dec 2016 (approved):

	'in_curation' has been modified:
		Before: True
		After: on Collected databases have changed:  Previous values: GenBank The DNA Data Bank of Japan IntAct molecular interaction database Addgene The Cambridge Structural Database figshare ArrayExpress European Nucleotide Archive PRoteomics IDEntifications database HUGO Gene Nomenclature Committee  NeuroMorpho.Org caNanoLab Database of Single Nucleotide Polymorphism Gene Expression Omnibus Sequence Read Archive PubChem Database of Genotypes and Phenotypes Database of genomic structural VARiation Dryad Nucleic Acids Database TreeBase UniProt Knowledgebase miRBase Sequence Database Giga Science Database Electron Microscopy Data Bank ProteomeXchange EBI Metagenomics OpenfMRI NeuroVault Coherent X-ray Imaging Data Bank International Neuroimaging Data-Sharing Initiative European Variation Archive Database of Genomic Variants Archive Experimental data repository for KInetic MOdels of biological SYStems Pangaea - Data Publisher for Earth and Environmental Science Global Biodiversity Information Facility Open Science Framework Worldwide Protein Data Bank BioSample at the NCBI PlasmID New values:  GenBank The DNA Data Bank of Japan IntAct molecular interaction database Addgene The Cambridge Structural Database figshare ArrayExpress European Nucleotide Archive PRoteomics IDEntifications database HUGO Gene Nomenclature Committee  NeuroMorpho.Org caNanoLab Database of Single Nucleotide Polymorphism Gene Expression Omnibus Sequence Read Archive PubChem Database of Genotypes and Phenotypes Database of genomic structural VARiation Dryad Nucleic Acids Database TreeBase UniProt Knowledgebase miRBase Sequence Database Giga Science Database Electron Microscopy Data Bank ProteomeXchange EBI Metagenomics OpenfMRI NeuroVault Coherent X-ray Imaging Data Bank International Neuroimaging Data-Sharing Initiative European Variation Archive Database of Genomic Variants Archive Experimental data repository for KInetic MOdels of biological SYStems Pangaea - Data Publisher for Earth and Environmental Science Global Biodiversity Information Facility Open Science Framework Worldwide Protein Data Bank BioSample at the NCBI PlasmID MetaboLights

Showing records 1 - 50 of 57.

Name	Abbreviation	Type	Subject	Domain	Taxonomy	Related Database	Related Standard	Related Policy	In Collection/Recommendation
Addgene	Addgene	Database	Life Science	Bibliography Deoxyribonucleic acid Plasmid	All	dkNET	GenBank Sequence Format RRID FASTA	Springer Nature - Nature Medicine - Availability of Data and materials Nature Publishing Group - Nature Photonics - Availability of Data and materials Nature Publishing Group - Nature Chemical Biology - Availability of Data and materials eLife Data Policy Nature Publishing Group - Nature Genetics - Availability of Data and materials Plus 11 more...	Data Citation Implementation eTRIKS Standards Starter Pack
Animals in Research: Reporting In Vivo Experiments	ARRIVE	Standard	Life Science	Animal research In vivo design	Animalia Metazoa	None	None	MNI Open Research UCL Child Open Health Research American Society for Clinical Investigation - Journal of Clinical Investigation - Information for Authors HRB Open Research JNCI: Journal of the National Cancer Institute Data Policy Plus 17 more...	None
ArrayExpress	ArrayExpress	Database	Functional Genomics	Chromatin immunoprecipitation - DNA microarray Chromatin immunoprecipitation - DNA sequencing DNA microarray Experimental measurement Gene expression data Plus 7 more...	All	BioSD Expression Atlas Bgee ENA GEO Plus 14 more...	MAGE-TAB EFO MINSEQE MIAME/Env MIAME Plus 3 more...	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Elsevier's Data Policy EMBO Recommended Databases and Data Standards Plus 53 more...	Data Citation Implementation EOSC-Life ELIXIR Core Data Resources and Deposition Databases Advanced Genetics RDA Covid-19 WG Resources
caNanoLab	caNanoLab	Database	Biomedical Science Nanotechnology	Molecular structure Bioactivity Nanoparticle Structure	Homo sapiens Mus musculus	None	NPO	PLOS Recommended Repositories Elsevier's Data Policy Annals of Global Health Editorial Policies Cell Press - Cell Metabolism - Information for Authors SciData Data Policy Plus 10 more...	NIH-supported data repositories Data Citation Implementation
Case Reports	CARE	Standard	Biomedical Science	Patient care	Homo sapiens	None	CONSORT - OE	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Gates Open Research Data Guidelines Plus 4 more...	RDA Covid-19 WG Resources ISO/CD 20691 Collection - DRAFT
Coherent X-ray Imaging Data Bank	CXIDB	Database	Life Science	Molecular structure X-ray diffraction Imaging	All	DataMed	CXI EDMI-Functional	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Plus 14 more...	Data Citation Implementation
Consolidated criteria for reporting qualitative research	COREQ	Standard	Biomedical Science Health Science Preclinical Studies	Study design	Homo sapiens	None	CONSORT	BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	RDA Covid-19 WG Resources
Consolidated Health Economic Evaluation Reporting Standards	CHEERS	Standard	Biomedical Science Health Science Medicine	None	Homo sapiens	None	None	BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	ISO/CD 20691 Collection - DRAFT BMJ - British Medical Journal
CONSOlidated standards of Reporting Trials	CONSORT	Standard	Biomedical Science Preclinical Studies	Data acquisition	Homo sapiens	None	COREQ CONSORT - OE CONSORT - UE TIDieR SPIRIT Plus 1 more...	MNI Open Research UCL Child Open Health Research American Society for Clinical Investigation - Journal of Clinical Investigation - Information for Authors HRB Open Research JNCI: Journal of the National Cancer Institute Data Policy Plus 35 more...	BMJ - British Medical Journal ISO/CD 20691 Collection - DRAFT RDA Covid-19 WG Resources
CONSOlidated Standards of Reporting Trials - Official Extensions	CONSORT - OE	Standard	Life Science Preclinical Studies	Data acquisition	Homo sapiens	None	CONSORT - UE CARE CONSORT	BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	BMJ - British Medical Journal ISO/CD 20691 Collection - DRAFT RDA Covid-19 WG Resources
CONsolidated Standards of Reporting Trials - Unofficial Extensions	CONSORT - UE	Standard	Life Science Preclinical Studies	Data acquisition	Homo sapiens	None	CONSORT - OE CONSORT	BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	BMJ - British Medical Journal ISO/CD 20691 Collection - DRAFT RDA Covid-19 WG Resources
Database of genomic structural VARiation	dbVar	Database	Biomedical Science Genomics Structural Biology Structural Genomics	DNA structural variation Genetic polymorphism Chromatin structure variation Genome Insertion	Homo sapiens	DGVa ClinVar DGV BovineMine	VarioML Common Metadata Elements for Cataloging Biomedical Datasets	PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Cold Spring Harbor Lab Press - Genome Research Plus 37 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Advanced Genetics
~~Database of Genomic Variants Archive~~	~~DGVa~~	Database	Genomics	Genetic polymorphism Curated information Structure Sequence variant	All	ArrayExpress ENA EGA Ensembl dbVar Plus 2 more...	None	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Springer Nature - Research Data Policies HRB Open Research Plus 25 more...	Data Citation Implementation Advanced Genetics
Database of Genotypes and Phenotypes	dbGaP	Database	Biomedical Science Epigenetics Genetics	Gene expression data Genetic polymorphism Genome-wide association study Genotype Phenotype	Homo sapiens	EGA GWAS Central ImmPort BioSample NSRR Plus 5 more...	VCF SRA-XML DUO Common Metadata Elements for Cataloging Biomedical Datasets BAM	NIH GWAS Sharing Policy IH Policy on sharing of model organisms for Biomedical Research PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Plus 39 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Advanced Genetics RDA Covid-19 WG Resources
Database of Single Nucleotide Polymorphism	dbSNP	Database	Life Science	Genetic polymorphism Single nucleotide polymorphism Genome	Homo sapiens	PolymiRTS T1DBase GWAS Central EVA ClinVar Plus 6 more...	JSON XML Common Metadata Elements for Cataloging Biomedical Datasets	NIH GWAS Sharing Policy PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 38 more...	NIH-supported data repositories Data Citation Implementation National Child Development Study (UK) Open Science Prize Advanced Genetics
DNA Data Bank of Japan	DDBJ	Database	Bioinformatics Data Management Data Submission, Annotation and Curation Functional Genomics Genomics Plus 2 more...	Annotation DNA sequence data Sequence annotation Data storage Deoxyribonucleic acid Plus 4 more...	All	GenBank ENA NCBI Viral Genomes Resource NextDB JGA Plus 7 more...	NCBITAXON GenBank Sequence Format FASTA INSDSeq FASTQ Sequence and Sequence Quality Format Plus 2 more...	PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Elsevier's Data Policy Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 53 more...	RDA Covid-19 WG Resources Data Citation Implementation
Dryad	Dryad	Database	Engineering Science Humanities and Social Sciences Natural Science	Curated information Literature curation	All	GenBank TreeBase ORCID Registry DataMed Zenodo Plus 3 more...	Common Metadata Elements for Cataloging Biomedical Datasets DataCite Metadata Schema Schema.org PLOSTHES DOI Plus 5 more...	PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Elsevier's Data Policy Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 36 more...	NIH-supported data repositories Data Citation Implementation BMJ - British Medical Journal General Repository Comparison National Transportation Data Preservation Network (NTDPN) Plus 1 more...
Electron Microscopy Data Bank	EMDB	Database	Biology Epidemiology Virology	Biological imaging X-ray diffraction Electron density map Electron microscopy Microscopy Plus 1 more...	All	CCD PDBe RCSB PDB DataMed EMPIAR Plus 1 more...	PDB PDBx/mmCIF	PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 EMBO Recommended Databases and Data Standards Plus 33 more...	Data Citation Implementation EOSC-Life ELIXIR Core Data Resources and Deposition Databases COVID-19 Resources RDA Covid-19 WG Resources Plus 1 more...
European Nucleotide Archive	ENA	Database	Bioinformatics Data Management Data Submission, Annotation and Curation Functional Genomics Genomics Plus 2 more...	Annotation DNA sequence data Genomic assembly Sequence annotation Data storage Plus 6 more...	All	GenBank BioSD DDBJ ArrayExpress Europe PMC Plus 22 more...	SRA-XML NCBITAXON MIASPPE FASTA INSDSeq Plus 7 more...	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Elsevier's Data Policy Plus 61 more...	Data Citation Implementation EOSC-Life ELIXIR Core Data Resources and Deposition Databases Advanced Genetics RDA Covid-19 WG Resources Plus 1 more...
European Variation Archive	EVA	Database	Biomedical Science Genetics Genomics	DNA structural variation Genetic polymorphism Genotype Sequencing Sequence variant	All	ENA EGA dbSNP UniProtKB DGVa Plus 5 more...	SO HGNC	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Plus 26 more...	Data Citation Implementation EOSC-Life ELIXIR Core Data Resources and Deposition Databases RDA Covid-19 WG Resources
Experimental data repository for KInetic MOdels of biological SYStems	KiMoSys	Database	Life Science Metabolomics	Reaction data Enzyme Metabolite	All	None	SBML CellML	PLOS Recommended Repositories SciData Data Policy eLife Data Policy BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	Data Citation Implementation
FAIRsharing	FAIRsharing	Database	Agriculture Biomedical Science Earth Science Environmental Science Humanities Plus 2 more...	FAIR	All	ORCID Registry	Schema.org BioDBCore Bioschemas SRAO DOI Plus 4 more...	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Elsevier's Data Policy EMBO Recommended Databases and Data Standards Plus 13 more...	EOSC-Life Bioschemas ELIXIR Recommended Interoperability Resources ELIXIR UK node resources Advanced Genetics
figshare	figshare	Database	Data Management Data Visualization	Data storage Image	All	OSF ORCID Registry 4TU.ResearchData Scientific Data ISA-explorer ISU DataShare Plus 6 more...	RDF DataCite Metadata Schema Schema.org DC CERIF Plus 3 more...	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Elsevier's Data Policy Plus 35 more...	NIH-supported data repositories Data Citation Implementation General Repository Comparison
FORCE11 Data Citation Principles	FORCE11 DC	Standard	Life Science	Citation	All	Zenodo Ag Data Commons Imperial College Research Data Repository DataStream DesignSafe Data Depot Repository	Compact Identifier Format Reporting guidelines for research resources	MNI Open Research UCL Child Open Health Research HRB Open Research JNCI: Journal of the National Cancer Institute Data Policy AAS Policy Plus 11 more...	ISO/CD 20691 Collection - DRAFT Advanced Genetics
GenBank	GenBank	Database	Bioinformatics Data Management Data Submission, Annotation and Curation Epidemiology Functional Genomics Plus 4 more...	Annotation DNA sequence data Genomic assembly Nucleic acid sequence Data storage Plus 9 more...	All	DDBJ IMG/M NONCODE GENI-ACT GOLD Plus 22 more...	SRA-XML NCBITAXON GenBank Sequence Format FASTA ABCDDNA Plus 6 more...	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Elsevier's Data Policy Plus 67 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Advanced Genetics COVID-19 Resources Plus 2 more...
Gene Expression Omnibus	GEO	Database	Epidemiology Life Science Virology	DNA microarray Gene expression data Genome	All	NONCODE Nematode.net Bgee ArrayExpress SMD Plus 27 more...	FAANG metadata experiment specification standard MIAME/Env MINiML SOFT Common Metadata Elements for Cataloging Biomedical Datasets Plus 1 more...	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Elsevier's Data Policy Plus 64 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Advanced Genetics Systems Medicine Plus 3 more...
Giga Science Database	GigaDB	Database	Computational Biology Genetics Genomics Life Science Proteomics	Gene expression data Imaging Sequencing Software	All	DataMed DataCite	DataCite Metadata Schema NCBITAXON Bioschemas ISA-Tab	PLOS Recommended Repositories eLife Data Policy BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	Data Citation Implementation Bioschemas RDA Covid-19 WG Resources
Global Biodiversity Information Facility	GBIF	Database	Biodiversity Bioinformatics Life Science	Taxonomic classification	All	Scratchpads Brazilian Flora 2020 REFLORA ALA IPT - GBIF Australia Repository GBIF Spain IPT - GBIF Spain Repository Plus 32 more...	DwC TAPIR ABCD EML Bioschemas	PLOS Recommended Repositories Elsevier's Data Policy Open Research Data and Data Management Plans - Information for ERC grantees by the ERC Scientific Council SciData Data Policy eLife Data Policy Plus 2 more...	Data Citation Implementation Bioschemas Global Biodiversity Information Facility (GBIF) international open data infrastructure
HUGO Gene Nomenclature Committee	HGNC	Database	Life Science Ontology and Terminology	Gene name Gene	Homo sapiens	FlyBase STRING HPRD MGDD CRC Atlas Plus 13 more...	HGNC VGNC	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Advanced Genetics Plus 6 more...	Data Citation Implementation Advanced Genetics
IntAct molecular interaction database	IntAct	Database	Biology	Citation Experimental measurement Gene Ontology enrichment Gene name Protein domain Plus 6 more...	All	MINT Gene3D neXtProt APID Interactomes Reactome Plus 22 more...	ChEBI MIRO PSI-PAR XML MITAB GO Plus 5 more...	PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 EMBO Recommended Databases and Data Standards Plus 12 more...	Data Citation Implementation International Molecular Exchange Consortium (IMEx) EOSC-Life ELIXIR Core Data Resources and Deposition Databases COVID-19 Resources Plus 1 more...
International Neuroimaging Data-Sharing Initiative	INDI	Database	Biomedical Science Life Science	Diffusion tensor imaging Functional magnetic resonance imaging Brain imaging Phenotype	Homo sapiens	NITRC-R ABIDE	MIfMRI	PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 2 (for life sciences) Plus 7 more...	Open Science Prize Data Citation Implementation
Investigation Study Assay Tabular	ISA-Tab	Standard	Functional Genomics Life Science	Biological sample DNA microarray Experimental measurement Gene expression data Report Plus 7 more...	All	SCDE MTBLS GMD CEBS GigaDB Plus 11 more...	CL OBI ECO BTO RNAO Plus 21 more...	EMBO Recommended Databases and Data Standards Advanced Genetics BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	Metabolomics Standards and Databases H2020 Phenome and Metabolome aNalysis (PhenoMenal) Project FAIRDOM Community Standards bioCADDIE eTRIKS Standards Starter Pack Plus 8 more...
MetaboLights	MTBLS	Database	Data Submission, Annotation and Curation Metabolomics Structural Biology	Biocuration Biological sample Chemical formula Chemical structure Mass spectrometry spectra Plus 9 more...	All	Rhea WikiPathways BRENDA OmicsDI DES-TOMATO Plus 1 more...	nmrCV ISA-Tab ChEBI PSI-MS CV BTO Plus 3 more...	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Plus 18 more...	Metabolomics Standards and Databases Data Citation Implementation H2020 Phenome and Metabolome aNalysis (PhenoMenal) Project EOSC-Life ELIXIR Core Data Resources and Deposition Databases Plus 2 more...
MGnify	MGnify	Database	Biodiversity Biomedical Science Data Submission, Annotation and Curation Environmental Science Life Science Plus 3 more...	Annotation DNA sequence data Gene prediction Metagenome Sequence annotation Plus 5 more...	All Anopheles gambiae Arabidopsis thaliana Bos indicus Bos taurus Plus 6 more...	ENA PoDP	MIxS - MIGS/MIMS FASTA MIxS GO FASTQ Sequence and Sequence Quality Format	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Plus 14 more...	Data Citation Implementation EOSC-Life ELIXIR Non-CDR and Non-Deposition Database RDA Covid-19 WG Resources
MIAME Notation in Markup Language	MINiML	Standard	Functional Genomics Life Science	DNA microarray Gene expression data Report Assay	All	GEO SMIR	XML MIAME	Advanced Genetics BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	bioCADDIE Advanced Genetics RDA Covid-19 WG Resources
Minimum Information about any (x) Sequence	MIxS	Standard	None	DNA sequence data Metagenome Deoxyribonucleic acid Genetic marker Genome Plus 1 more...	Archaea Bacteria Eukaryota	GenBank DDBJ GOLD ENA EGA Plus 6 more...	Micro B3 GGBN GCDML MIxS - MIGS/MIMS MIxS - MIMARKS Plus 3 more...	SciData Data Policy BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	ISO/CD 20691 Collection - DRAFT Genomic Standards Consortium
miRBase	miRBase	Database	Biology	Crowdsourcing RNA sequence Gene Micro RNA Ribonucleic acid	All	PolymiRTS miRNEST FlyMine SIGNOR GREENC Plus 5 more...	ENA Sequence Flat File Format FASTA	PLOS Recommended Repositories Cold Spring Harbor Lab Press - Genome Research eLife Data Policy BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist Plus 2 more...	Open Science Prize Data Citation Implementation
NCBI BioSample	BioSample	Database	Biology	Biological sample DNA structural variation Gene expression data Assay Cell line Plus 6 more...	All	GenBank GEO SRA dbGaP dkNET Plus 4 more...	FAANG metadata experiment specification standard BioProject XML Schema FAANG metadata analysis specification FAANG metadata sample specification standard	MNI Open Research UCL Child Open Health Research HRB Open Research AAS Policy Springer Nature - Nature Medicine - Availability of Data and materials Plus 16 more...	Data Citation Implementation Advanced Genetics RDA Covid-19 WG Resources
NeuroMorpho.Org	NeuroMorpho.Org	Database	Computational Neuroscience Neuroscience	Cell morphology Molecular structure Neuron Structure	Metazoa	DataMed PCTD	NIFSTD ABA Common Metadata Elements for Cataloging Biomedical Datasets	PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Elsevier's Data Policy Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 10 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize
NeuroVault	NeuroVault	Database	Biomedical Science Life Science Neurobiology	Functional magnetic resonance imaging Brain imaging	Homo sapiens	DataMed	NIDM Schema.org Compact Identifier Format CogAt	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy HRB Open Research AAS Policy Plus 16 more...	Data Citation Implementation
Nucleic Acids Database	NDB	Database	Genomics Life Science	Nucleic acid sequence Deoxyribonucleic acid Ribonucleic acid	All	MINAS tpsic	PDB RNAO PDBx/mmCIF TSV	EMBO Recommended Databases and Data Standards Rockefeller University Press - Journal Of Cell Biology - Data Deposition BioMed Central - Minimum Standards of Reporting Checklist Rockefeller University Press - Journal Of Experimental Medicine - Data Deposition GigaScience - Minimum Standards of Reporting Checklist	Data Citation Implementation
OpenNeuro	OpenNeuro	Database	Biomedical Science Life Science Neurobiology	Cognition Imaging Magnetic resonance imaging	Homo sapiens	brainlife	BIDS JSON TSV	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Elsevier's Data Policy Plus 26 more...	Open Science Prize Data Citation Implementation
Open Science Framework	OSF	Database	Data Management	Cancer Data storage Study design	All	figshare ORCID Registry DataCite DataverseNL BOARD	DataCite Metadata Schema DOI JSON Crossref Metadata Deposit Schema	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Elsevier's Data Policy HRB Open Research Plus 15 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Advanced Genetics General Repository Comparison
PANGAEA - Data Publisher for Earth and Environmental Science	PANGAEA	Database	Agriculture Atmospheric Science Biodiversity Biology Chemistry Plus 9 more...	Marine environment	All	BacDive WRMC-BSRN APGC GTN-P meereisportal.de Data Portal Plus 2 more...	DataCite Metadata Schema Schema.org DC Micro B3 DwC Plus 5 more...	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Elsevier's Data Policy HRB Open Research Plus 16 more...	FAIRsFAIR Support Programme for Data Repositories Data Citation Implementation
~~PlasmID~~	~~PlasmID~~	Database	Biology Biomedical Science	RNA interference Cloning plasmid Deoxyribonucleic acid Mutation analysis Plasmid	Homo sapiens Mus musculus	None	None	eLife Data Policy BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	Data Citation Implementation
Preferred Reporting Items for Systematic reviews and Meta-Analyses	PRISMA	Standard	Biomedical Science Preclinical Studies	Data transformation Systematic review	Homo sapiens	None	None	MNI Open Research UCL Child Open Health Research American Society for Clinical Investigation - Journal of Clinical Investigation - Information for Authors HRB Open Research JNCI: Journal of the National Cancer Institute Data Policy Plus 15 more...	BMJ - British Medical Journal ISO/CD 20691 Collection - DRAFT RDA Covid-19 WG Resources
ProteomeXchange	ProteomeXchange	Database	Life Science Proteomics	Peptide identification Interactome	All	PRIDE PeptideAtlas DataMed jPOSTrepo MassIVE Plus 2 more...	MIAPE-MS MIAPE PRIDE XML Format MIAPE-MSI	PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Elsevier's Data Policy Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 11 more...	Data Citation Implementation
PRoteomics IDEntifications database	PRIDE	Database	Life Science Proteomics	Peptide identification Protein identification Curated information Peptide Protein	All	BioSD Expression Atlas Ensembl gpmDB ProteomeXchange Plus 8 more...	mzQuantML HUPO-PSI TraML mzML MIAPE OmicsDI XML format Plus 9 more...	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Plus 34 more...	Data Citation Implementation EOSC-Life ELIXIR Core Data Resources and Deposition Databases Advanced Genetics
PubChem	PubChem	Database	Epidemiology Life Science Virology	Molecular structure Assay Protein Small molecule Structure	All	ChEMBL WikiPathways CTD Guide to Pharmacology ChemIDplus Plus 16 more...	CHEMINF GO MIARE MESH NDFRT Plus 4 more...	PLOS Recommended Repositories Springer Nature Research Data Policy Type 1 Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 2 (for life sciences) Plus 22 more...	NIH-supported data repositories Toxicology Data Citation Implementation Open Science Prize Advanced Genetics Plus 2 more...
Research Resource Identifiers	RRID	Standard	Biomedical Science Chemistry Life Science	None	All	FlyBase WormBase antibodyregistry.org Addgene RGD Plus 9 more...	Reporting guidelines for research resources JATS	Advanced Genetics Nature Publishing Group - Nature Materials - Availability of Data and materials Nature Publishing Group - Nature Genetics - Availability of Data and materials BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist Plus 1 more...	Advanced Genetics

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