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PLOS

PLOS has identified a set of established repositories and data standards, which are recognized and trusted within their respective communities, for their journals PLOS Biology, PLOS Medicine, PLOS ONE, PLOS Genetics, PLOS Computational Biology, PLOS Pathogens, and PLOS Neglected Tropical Diseases. PLOS requires that authors comply with field-specific standards for preparation and recording of data and select repositories appropriate to their field, for example deposition of microarray data in ArrayExpress or GEO; deposition of gene sequences in GenBank, EMBL or DDBJ; and deposition of ecological data in Dryad. Authors are encouraged to select repositories that meet accepted criteria as trustworthy digital repositories.

This record is maintained by: eganley , PLOSData

This recommendation is taken from the following policy:

PLOS Recommended Data Repositories.

Record updated: April 10, 2017, 11:41 a.m. by The FAIRsharing Team.

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Edits to 'https://fairsharing.org/bsg-c000009' by 'The FAIRsharing Team' at 11:28, 18 Aug 2016 (approved):

	'name' has been modified:
		Before: PLOS
		After: PLOS Domain list has changed:  Previous values: Biological databases|| Biomedical science|| Data sharing|| Life Science|domain| Metadata standards|| New values:  Biological databases|| Biomedical Science|None| Data sharing|| Life Science|domain| Metadata standards||

Showing records 1 - 50 of 87.

Name	Abbreviation	Type	Subject	Domain	Taxonomy	Related Database	Related Standard	Related Policy	In Collection/Recommendation
ArrayExpress	ArrayExpress	Database	Functional Genomics	Chromatin immunoprecipitation - DNA microarray Chromatin immunoprecipitation - DNA sequencing DNA microarray Experimental measurement Gene expression data Plus 7 more...	All	BioSD Expression Atlas Bgee ENA GEO Plus 14 more...	MAGE-TAB EFO MINSEQE MIAME/Env MIAME Plus 3 more...	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy PLOS Recommended Repositories EMBO Recommended Databases and Data Standards Plus 51 more...	Data Citation Implementation DNA Microarray EOSC-Life ELIXIR Core Data Resources and Deposition Databases Advanced Genetics Plus 1 more...
Australian Antarctic Data Centre	AADC	Database	Atmospheric Science Biology Earth Science Environmental Science Geology Plus 4 more...	None	All	GBIF	None	PLOS Recommended Repositories eLife Data Policy SciData Data Policy	None
Biological General Repository for Interaction Datasets	BioGRID	Database	Biochemistry Bioinformatics Chemical Biology Cheminformatics Life Science Plus 2 more...	Biocuration Protein interaction High-throughput screening Gene Interactome Plus 5 more...	Arabidopsis thaliana Bos taurus Caenorhabditis elegans Candida albicans Drosophila melanogaster Plus 12 more...	AnimalTFDB FlyBase PhenoM SGD PomBase Plus 25 more...	MIRO BTO MITAB PSI-MI XML CLO Plus 3 more...	PLOS Recommended Repositories Cold Spring Harbor Lab Press - Genome Research eLife Data Policy SciData Data Policy Cell Press - Current Biology - Information for Authors	NIH-supported data repositories Data Citation Implementation Open Science Prize COVID-19 Resources
Biological Magnetic Resonance Databank	BMRB	Database	Structural Biology	Protein structure Molecular entity Nuclear Magnetic Resonance (NMR) spectroscopy Nucleic acid Peptide Plus 3 more...	All	PDBe Protein Data Bank Japan RCSB PDB wwPDB DataMed	PDB NMR-STAR nmrCV CCPN data model NMR-ML Plus 1 more...	Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 2 (for life sciences) Plus 22 more...	Data Citation Implementation
BioStudies	BioStudies	Database	Biomedical Science Life Science	Protocol Study design	All	ENA BioImage Archive COVID-19 Data Portal	None	PLOS Recommended Repositories EMBO Recommended Databases and Data Standards Open Research Data and Data Management Plans - Information for ERC grantees by the ERC Scientific Council	EOSC-Life ELIXIR Core Data Resources and Deposition Databases
caNanoLab	caNanoLab	Database	Biomedical Science Nanotechnology	Bioactivity Nanoparticle Structure	Homo sapiens Mus musculus	None	NPO	Elsevier's Data Policy PLOS Recommended Repositories Cell Press - Cell Metabolism - Information for Authors SciData Data Policy Cell Press - Molecular Cell - Information for Authors Plus 9 more...	NIH-supported data repositories Data Citation Implementation
Coherent X-ray Imaging Data Bank	CXIDB	Database	Life Science	Molecular structure X-ray diffraction Imaging	All	DataMed	CXI EDMI-Functional	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 14 more...	Data Citation Implementation
Comprehensive Antibiotic Resistance Database	CARD	Database	Life Science	DNA sequence data Antimicrobial Phenotype polypeptide_region	Bacteria	PATRIC	SO	PLOS Recommended Repositories	None
Crystallography Open Database	COD	Database	Chemistry Inorganic Molecular Chemistry Organic Chemistry	Molecular structure X-ray crystallography assay X-ray diffraction	All	American Mineralogist Crystal Structure Database	SMILES	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 13 more...	Chemistry Data Citation Implementation
CSIRO Data Access Portal	CSIRO DAP	Database	Astrophysics and Astronomy Biomedical Science Chemistry Humanities Life Science Plus 5 more...	None	All	None	None	PLOS Recommended Repositories	Chemistry
DANS-EASY Electronic Archiving System	EASY	Database	Classical Archaeology Earth Science Economics Humanities Life Science Plus 2 more...	None	Not applicable	EDNA	None	PLOS Recommended Repositories Gates Open Research Data Guidelines	None
Database of genomic structural VARiation	dbVar	Database	Biomedical Science Genomics Structural Biology Structural Genomics	DNA structural variation Genetic polymorphism Chromatin structure variation Genome Insertion	Homo sapiens	DGVa ClinVar DGV BovineMine	VarioML Common Metadata Elements for Cataloging Biomedical Datasets	Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Cold Spring Harbor Lab Press - Genome Research Plus 37 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Advanced Genetics
~~Database of Genomic Variants Archive~~	~~DGVa~~	Database	Genomics	Genetic polymorphism Curated information Structure Sequence variant	All	ArrayExpress ENA EGA Ensembl dbVar Plus 2 more...	None	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories Springer Nature - Research Data Policies HRB Open Research Plus 25 more...	Data Citation Implementation Advanced Genetics
Database of Genotypes and Phenotypes	dbGaP	Database	Biomedical Science Epigenetics Genetics	Gene expression data Genetic polymorphism Genome-wide association study Genotype Phenotype	Homo sapiens	GWAS Central ImmPort BioSample NSRR DataMed Plus 3 more...	VCF SRA-XML DUO Common Metadata Elements for Cataloging Biomedical Datasets BAM	NIH GWAS Sharing Policy IH Policy on sharing of model organisms for Biomedical Research Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 39 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Advanced Genetics RDA Covid-19 WG Resources
Database of Interacting Proteins	DIP	Database	Biology	Pathway or network prediction Protein interaction High-throughput screening Protein	All	APID Interactomes STRING VirHostNet iRefWeb mentha Plus 4 more...	MITAB MIRO FASTA Common Metadata Elements for Cataloging Biomedical Datasets PSI-MI XML Plus 1 more...	Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 EMBO Recommended Databases and Data Standards Plus 10 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize International Molecular Exchange Consortium (IMEx)
Database of Single Nucleotide Polymorphism	dbSNP	Database	Life Science	Genetic polymorphism Single nucleotide polymorphism Genome	Homo sapiens	PolymiRTS T1DBase GWAS Central EVA ClinVar Plus 6 more...	JSON XML Common Metadata Elements for Cataloging Biomedical Datasets	NIH GWAS Sharing Policy Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 38 more...	NIH-supported data repositories Data Citation Implementation National Child Development Study (UK) Open Science Prize Advanced Genetics
DNA Data Bank of Japan	DDBJ	Database	Bioinformatics Data Management Data Submission, Annotation and Curation Functional Genomics Genomics Plus 2 more...	Annotation DNA sequence data Sequence annotation Data storage Deoxyribonucleic acid Plus 4 more...	All	GenBank ENA NCBI Viral Genomes Resource NextDB JGA Plus 7 more...	NCBITAXON GenBank Sequence Format FASTA FASTQ Sequence and Sequence Quality Format INSDSeq Plus 2 more...	Elsevier's Data Policy Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 51 more...	RDA Covid-19 WG Resources Data Citation Implementation
Dryad	Dryad	Database	Engineering Science Humanities and Social Sciences Natural Science	Curated information Literature curation	All	GenBank TreeBase ORCID Registry DataMed DataONE Plus 2 more...	DataCite Metadata Schema Common Metadata Elements for Cataloging Biomedical Datasets Schema.org PLOSTHES DOI Plus 4 more...	Elsevier's Data Policy Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Plus 33 more...	NIH-supported data repositories Data Citation Implementation BMJ - British Medical Journal General Repository Comparison National Transportation Data Preservation Network (NTDPN)
Electron Microscopy Data Bank	EMDB	Database	Biology Epidemiology Virology	Biological imaging X-ray diffraction Electron density map Electron microscopy Microscopy Plus 1 more...	All	CCD PDBe RCSB PDB DataMed EMPIAR Plus 1 more...	PDB PDBx/mmCIF	Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 EMBO Recommended Databases and Data Standards Plus 33 more...	Data Citation Implementation EOSC-Life ELIXIR Core Data Resources and Deposition Databases COVID-19 Resources RDA Covid-19 WG Resources
Environmental Data Initiative Data Repository	EDI	Database	Agriculture Atmospheric Science Biology Botany Earth Science Plus 11 more...	Ecosystem	All	None	EML DOI	PLOS Recommended Repositories eLife Data Policy SciData Data Policy	None
Eukaryotic Pathogen, Vector and Host Informatics Resource	VEuPathDB	Database	Comparative Genomics Genomics Population Genetics	Genome Orthologous Pathogen Phenotype	Anncaliia Babesia Crithidia Cryptosporidium Edhazardia Plus 19 more...	FungiDB CryptoDB GiardiaDB MicrosporidiaDB PlasmoDB Plus 6 more...	OBI FASTA GFF3 Common Metadata Elements for Cataloging Biomedical Datasets	PLOS Recommended Repositories Advanced Genetics eLife Data Policy SciData Data Policy	NIH-supported data repositories Data Citation Implementation Open Science Prize EOSC-Life ELIXIR UK node resources Plus 1 more...
European Nucleotide Archive	ENA	Database	Bioinformatics Data Management Data Submission, Annotation and Curation Functional Genomics Genomics Plus 2 more...	Annotation DNA sequence data Genomic assembly Sequence annotation Data storage Plus 6 more...	All	GenBank BioSD DDBJ ArrayExpress Europe PMC Plus 22 more...	SRA-XML NCBITAXON MIASPPE FASTA FASTQ Sequence and Sequence Quality Format Plus 7 more...	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Plus 59 more...	Data Citation Implementation EOSC-Life ELIXIR Core Data Resources and Deposition Databases Advanced Genetics RDA Covid-19 WG Resources
European Variation Archive	EVA	Database	Biomedical Science Genetics Genomics	DNA structural variation Genetic polymorphism Genotype Sequencing Sequence variant	All	ENA EGA dbSNP UniProtKB DGVa Plus 5 more...	SO HGNC	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 26 more...	Data Citation Implementation EOSC-Life ELIXIR Core Data Resources and Deposition Databases RDA Covid-19 WG Resources
Experimental data repository for KInetic MOdels of biological SYStems	KiMoSys	Database	Life Science Metabolomics	Reaction data Enzyme Metabolite	All	None	CellML SBML	PLOS Recommended Repositories eLife Data Policy SciData Data Policy BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	Data Citation Implementation
FAIRsharing	FAIRsharing	Database	Agriculture Biomedical Science Earth Science Environmental Science Humanities Plus 2 more...	FAIR	All	None	Schema.org BioDBCore Bioschemas SRAO DOI Plus 2 more...	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy PLOS Recommended Repositories EMBO Recommended Databases and Data Standards Plus 13 more...	EOSC-Life Bioschemas ELIXIR Recommended Interoperability Resources ELIXIR UK node resources Advanced Genetics
figshare	figshare	Database	Data Management Data Visualization	Data storage Image	All	OSF ORCID Registry 4TU.ResearchData Scientific Data ISA-explorer ISU DataShare Plus 6 more...	DataCite Metadata Schema RDF Schema.org DC CERIF Plus 3 more...	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 32 more...	NIH-supported data repositories Data Citation Implementation General Repository Comparison
FlowRepository	FlowRepository	Database	Biology Cell Biology Life Science	Cell Cellular assay Flow cytometry assay	All	None	Gating-ML FuGEFlow MIFlowCyt FCS	PLOS Recommended Repositories EMBO Recommended Databases and Data Standards Cell Press - Cell Metabolism - Information for Authors Cell Press - Neuron - Information for Authors Cell Press - Cell Host & Microbe - Information for Authors Plus 10 more...	Data Citation Implementation
FlyBase	FlyBase	Database	Anatomy Bioinformatics Comparative Genomics Data Submission, Annotation and Curation Functional Genomics Plus 5 more...	Bibliography Biocuration CRISPR Citation Clone library Plus 27 more...	Drosophila Drosophila ananassae Drosophila erecta Drosophila grimshawi Drosophila melanogaster Plus 8 more...	DRSC-FGR NONCODE SGD WormBase GenomeRNAi Plus 16 more...	FBbi FB-DV SO ECO FBsp Plus 14 more...	Elsevier's Data Policy PLOS Recommended Repositories Rockefeller University Press - Journal Of Cell Biology - Data Deposition Open Research Data and Data Management Plans - Information for ERC grantees by the ERC Scientific Council Advanced Genetics Plus 4 more...	NIH-supported data repositories Open Science Prize Advanced Genetics
GenBank	GenBank	Database	Bioinformatics Data Management Data Submission, Annotation and Curation Epidemiology Functional Genomics Plus 4 more...	Annotation DNA sequence data Genomic assembly Nucleic acid sequence Data storage Plus 9 more...	All	DDBJ IMG/M NONCODE GENI-ACT GOLD Plus 22 more...	SRA-XML NCBITAXON GenBank Sequence Format FASTA FASTQ Sequence and Sequence Quality Format Plus 6 more...	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Plus 64 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize Advanced Genetics COVID-19 Resources Plus 1 more...
Gene Expression Omnibus	GEO	Database	Epidemiology Life Science Virology	DNA microarray Gene expression data Genome	All	NONCODE Nematode.net Bgee ArrayExpress SMD Plus 26 more...	FAANG metadata experiment specification standard MIAME/Env MINiML SOFT Common Metadata Elements for Cataloging Biomedical Datasets Plus 1 more...	MNI Open Research UCL Child Open Health Research Elsevier's Data Policy Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Plus 61 more...	NIH-supported data repositories Data Citation Implementation DNA Microarray Open Science Prize Advanced Genetics Plus 3 more...
GenomeRNAi	GenomeRNAi	Database	Life Science	RNA interference Literature curation	Drosophila melanogaster Homo sapiens	FlyBase FlyMine	None	Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 2 (for life sciences) Plus 5 more...	Data Citation Implementation
Giga Science Database	GigaDB	Database	Computational Biology Genetics Genomics Life Science Proteomics	Gene expression data Imaging Sequencing Software	All	DataMed DataCite	ISA-Tab NCBITAXON DataCite Metadata Schema Bioschemas	PLOS Recommended Repositories eLife Data Policy BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist	Data Citation Implementation Bioschemas RDA Covid-19 WG Resources
Global Biodiversity Information Facility	GBIF	Database	Biodiversity Bioinformatics Life Science	Taxonomic classification	All	Scratchpads Brazilian Flora 2020 REFLORA ALA IPT - GBIF Australia Repository GBIF Spain IPT - GBIF Spain Repository Plus 30 more...	DwC TAPIR ABCD EML Bioschemas	PLOS Recommended Repositories Open Research Data and Data Management Plans - Information for ERC grantees by the ERC Scientific Council eLife Data Policy SciData Data Policy BioMed Central - Minimum Standards of Reporting Checklist Plus 1 more...	Data Citation Implementation Bioschemas Global Biodiversity Information Facility (GBIF) international open data infrastructure
G-Node Data Infrastructure Services	GIN	Database	Neurophysiology Neuroscience	Workflow	All	None	odML DOI	PLOS Recommended Repositories eLife Data Policy SciData Data Policy	None
Harvard Dataverse	Harvard Dataverse	Database	Data Management	Experimental measurement Protocol	All	SBGrid-DG ORCID Registry Scholars Portal Dataverse TDR DataverseNL Plus 7 more...	OBI NCBITAXON DataCite Metadata Schema Schema.org DC Plus 8 more...	Elsevier's Data Policy PLOS Recommended Repositories Experimental Results Cell Press - Cell Metabolism - Information for Authors Open Research Data and Data Management Plans - Information for ERC grantees by the ERC Scientific Council Plus 13 more...	General Repository Comparison National Transportation Data Preservation Network (NTDPN)
High Energy Physics Data Repository	HEPData	Database	Chemistry Particles, Nuclei and Fields Physics	None	Not applicable	DataCite	Schema.org DOI JSON	Elsevier's Data Policy PLOS Recommended Repositories Open Research Data and Data Management Plans - Information for ERC grantees by the ERC Scientific Council eLife Data Policy SciData Data Policy	Chemistry
Image Data Resource	IDR	Database	Biomedical Science Botany	Biological imaging High-content screen Super-resolution microscopy	Arabidopsis thaliana Drosophila Homo sapiens Mus musculus Saccharomyces cerevisiae Plus 2 more...	Ensembl SSBD SYSGRO ISPAMM BioImage Archive	OME-XML OME-TIFF CMPO EDMI-Functional GO Plus 1 more...	PLOS Recommended Repositories EMBO Recommended Databases and Data Standards Open Research Data and Data Management Plans - Information for ERC grantees by the ERC Scientific Council eLife Data Policy SciData Data Policy	OME Euro-BioImaging EOSC-Life
Influenza Research Database	IRD	Database	Biomedical Science Epidemiology Genomics Proteomics Virology	Gene expression data Sequence feature Structure	Influenza virus	GenBank CSA RefSeq BEI RCSB PDB Plus 2 more...	OBI OGMS IDO IAO CLUSTAL-W Alignment Format Plus 5 more...	PLOS Recommended Repositories eLife Data Policy SciData Data Policy	NIH-supported data repositories Data Citation Implementation Open Science Prize COVID-19 Resources RDA Covid-19 WG Resources
IntAct molecular interaction database	IntAct	Database	Biology	Citation Experimental measurement Gene Ontology enrichment Gene name Protein domain Plus 6 more...	All	MINT Gene3D neXtProt APID Interactomes Reactome Plus 21 more...	ChEBI MIRO PSI-PAR XML MITAB GO Plus 5 more...	Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 EMBO Recommended Databases and Data Standards Plus 12 more...	Data Citation Implementation International Molecular Exchange Consortium (IMEx) EOSC-Life ELIXIR Core Data Resources and Deposition Databases COVID-19 Resources Plus 1 more...
Integrated Taxonomic Information System	ITIS	Database	Life Science Taxonomy	Taxonomic classification	All	Ag Data Commons	NIFSTD DwC	PLOS Recommended Repositories eLife Data Policy SciData Data Policy	Data Citation Implementation
International Neuroimaging Data-Sharing Initiative	INDI	Database	Biomedical Science Life Science	Diffusion tensor imaging Functional magnetic resonance imaging Brain imaging Phenotype	Homo sapiens	NITRC-R ABIDE	MIfMRI	Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Springer Nature Research Data Policy Type 4 Springer Nature Research Data Policy Type 2 (for life sciences) Plus 7 more...	Open Science Prize Data Citation Implementation
Inter-university Consortium for Political and Social Research	ICPSR	Database	Anthropology Criminology Data Governance Data Management Data Submission, Annotation and Curation Plus 7 more...	Behavior Curated information	Homo sapiens	DataMed NACJD CivicLEADS ADDEP	DDI-C DOI Schema.org DCTERMS Common Metadata Elements for Cataloging Biomedical Datasets	Elsevier's Data Policy PLOS Recommended Repositories Experimental Results Cell Press - Cell Metabolism - Information for Authors Cell Press - Neuron - Information for Authors Plus 4 more...	National Transportation Data Preservation Network (NTDPN) RDA Covid-19 WG Resources Open Science Prize
Kaggle Datasets	Kaggle Datasets	Database	Data Management	Data storage	All	None	DOI Schema.org Compact Identifier Format	PLOS Recommended Repositories	None
Knowledge Network for Biocomplexity	KNB	Database	Earth Science Ecology Environmental Science	Centrally registered identifier	All	None	EML DOI OBOE ESRI Shapefile netCDF	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories HRB Open Research AAS Policy Plus 4 more...	None
MetaboLights	MTBLS	Database	Data Submission, Annotation and Curation Metabolomics Structural Biology	Biocuration Biological sample Chemical formula Chemical structure Mass spectrometry spectra Plus 9 more...	All	Rhea WikiPathways BRENDA OmicsDI DES-TOMATO Plus 1 more...	ISA-Tab nmrCV ChEBI PSI-MS CV BTO Plus 3 more...	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 18 more...	Metabolomics Standards and Databases Data Citation Implementation H2020 Phenome and Metabolome aNalysis (PhenoMenal) Project EOSC-Life ELIXIR Core Data Resources and Deposition Databases Plus 2 more...
Metabolomics Workbench	MW	Database	Metabolomics	Metabolite Protocol	All	DataMed OmicsDI	mwTab OmicsDI XML format RefMet	PLOS Recommended Repositories EMBO Recommended Databases and Data Standards	NIH-supported data repositories Metabolomics Standards and Databases H2020 Phenome and Metabolome aNalysis (PhenoMenal) Project Open Science Prize
MGI Mouse Gene Expression Database	GXD	Database	Genetics Genomics Transcriptomics	Gene expression data Model organism RNA sequencing Genome	Mus musculus	Expression Atlas ArrayExpress MGI GEO MouseMine Plus 1 more...	MA EMAP GO MP DOID Plus 1 more...	PLOS Recommended Repositories Advanced Genetics eLife Data Policy	RDA Covid-19 WG Resources Advanced Genetics
MGnify	MGnify	Database	Biodiversity Biomedical Science Data Submission, Annotation and Curation Environmental Science Life Science Plus 3 more...	Annotation DNA sequence data Gene prediction Metagenome Sequence annotation Plus 5 more...	All Anopheles gambiae Arabidopsis thaliana Bos indicus Bos taurus Plus 6 more...	ENA PoDP	MIxS - MIGS/MIMS FASTA FASTQ Sequence and Sequence Quality Format MIxS GO	MNI Open Research UCL Child Open Health Research Springer Nature Research Data Policy Type 1 PLOS Recommended Repositories Springer Nature - Research Data Policies Plus 14 more...	Data Citation Implementation EOSC-Life ELIXIR Non-CDR and Non-Deposition Database RDA Covid-19 WG Resources
miRBase	miRBase	Database	Biology	Crowdsourcing RNA sequence Gene Micro RNA Ribonucleic acid	All	PolymiRTS miRNEST FlyMine SIGNOR GREENC Plus 5 more...	ENA Sequence Flat File Format FASTA	PLOS Recommended Repositories Cold Spring Harbor Lab Press - Genome Research eLife Data Policy BioMed Central - Minimum Standards of Reporting Checklist GigaScience - Minimum Standards of Reporting Checklist Plus 2 more...	Open Science Prize Data Citation Implementation
National Addiction & HIV Data Archive Program	NAHDAP	Database	Biomedical Science Social Science	Addiction Disease Drug	Homo sapiens Human immunodeficiency virus	None	Common Metadata Elements for Cataloging Biomedical Datasets DOI	MNI Open Research UCL Child Open Health Research PLOS Recommended Repositories HRB Open Research AAS Policy Plus 5 more...	NIH-supported data repositories Data Citation Implementation Open Science Prize

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