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Recommendation
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A biologically-centered subset of Scientific Data's recommended repositories and standards. Please see the Scientific Data website for the full list of repositories and standards across all domains. Scientific Data is an open access, peer-reviewed Nature Research data journal published by Springer Nature.

This record is maintained by: ScientificData 

This recommendation is taken from the following policy:

Record updated: April 25, 2017, 5:21 p.m. by ScientificData.

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Taxonomic range



Showing records 1 - 50 of 79.
Registry Name Abbreviation Type Domain Taxonomy Related Database Related Standard Related Policy In Collection/Recommendation Status

ArrayExpress ArrayExpress Database ready
BioAssay Ontology BAO Standard ready

Biological General Repository for Interaction Datasets BioGRID Database ready

Biological Magnetic Resonance Databank BMRB Database ready

caNanoLab caNanoLab Database None ready

ChEMBL: a large-scale bioactivity database for drug discovery ChEMBL Database ready

ClinicalTrials.gov ClinicalTrials.gov Database ready

Crystallography Open Database COD Database None ready

Coherent X-ray Imaging Data Bank CXIDB Database None ready

Database of Genotypes and Phenotypes dbGaP Database ready

Database of Single Nucleotide Polymorphism dbSNP Database ready

Database of genomic structural VARiation dbVar Database ready

The DNA Data Bank of Japan DDBJ Database ready

Database of Genomic Variants Archive DGVA Database None ready

Database of Interacting Proteins DIP Database ready

Dryad Dryad Database None ready

EBI Metagenomics EBI Metagenomics Database ready
Experimental Factor Ontology EFO Standard ready

The European Genome-phenome Archive EGA Database ready

Electron Microscopy Data Bank EMDB Database ready

European Nucleotide Archive ENA Database ready
Environment Ontology ENVO Standard ready
eagle-i Research Resource Ontology ERO Standard None ready

Eukaryotic Pathogen Database Resources EuPathDB Database ready

European Variation Archive EVA Database None ready

figshare figshare Database None None ready

FlowRepository FlowRepository Database None ready

FlyBase FlyBase Database ready

Global Biodiversity Information Facility GBIF Database ready

GenBank GenBank Database ready

GenomeRNAi GenomeRNAi Database None ready

Gene Expression Omnibus GEO Database ready

The Immunology Database and Analysis Portal - OpenImmport ImmPort Database ready

International Neuroimaging Data-Sharing Initiative INDI Database ready

IntAct molecular interaction database IntAct Database ready

Influenza Research Database IRD Database ready

Integrated Taxonomic Information System ITIS Database None None ready

Japanese Genotype-phenotype Archive JGA Database ready

Experimental data repository for KInetic MOdels of biological SYStems KiMoSys Database None ready

Life Science Database Archive LSDB Archive Database None None ready

Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource MGI Database ready

Minimum Information About a Microarray Experiment MIAME Standard ready

Minimum Information About a Proteomics Experiment MIAPE Standard ready

Minimum Information about a Molecular Interaction Experiment MIMIx Standard ready

Minimum Information about any (x) Sequence MIxS Standard ready

MorphoBank MorphoBank Database None ready

MetaboLights MTBLS Database ready

National Addiction & HIV Data Archive Program (NAHDAP) NAHDAP Database None None ready
NCBI Taxonomy NCBITAXON Standard ready

NCBI Trace Archives NCBI Trace Archives Database None None ready